Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1047 322 4e-83 seq14 194 1e-44 seq196 86.0 5e-12 >seq1047 Length=31309 Score = 322 bits (356), Expect = 4e-83 Identities = 1192/1855 (64%), Gaps = 37/1855 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || |||||||| ||||||||| |||| | ||||| | | ||| ||||| ||||| Sbjct 16733 TCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCGGTT 16792 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || ||||| ||| | |||||||| || |||| || ||| | || || ||||| Sbjct 16793 TTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCA 16852 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 || || || ||||| || ||||| || || ||| | || || || || ||||| Sbjct 16853 GCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCCATT 16912 Query 65258 TCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 | ||| | | || | || ||||||||||| || |||||||| || | | Sbjct 16913 TTGATGCAA-GTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGATGTGTTG 16971 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 ||||| ||||| || | || | ||| ||| | || | ||| || ||| Sbjct 16972 CGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCATTTC 17031 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436 || ||||| |||| || | |||| || | ||| ||| |||| | ||||| || Sbjct 17032 ATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTGAAA 17091 Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496 |||||| || ||||| | ||| |||| || || ||| |||||||| ||||| | Sbjct 17092 CTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTCGTT 17151 Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 ||| || || ||||| ||||| || || || ||||| || || | | || || || || Sbjct 17152 GTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATTGCG 17211 Query 65557 CAATCCGTTCATTTCAATGTTG---TGACGCAATTCGTCCCAGTTCCACATCGGTTTATC 65613 || || | | |||| || | | || || |||| | ||||| | | Sbjct 17212 CACGCCATGTGTCACAATATTTCTTTTAAGC---TCAGCCCAATCCCACAA-----TTCC 17263 Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673 || | | || | |||||| || | || ||| |||| | || | || || | Sbjct 17264 GTAGGCTTCTTCTC-CCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCC-AT 17321 Query 65674 GAAACTAT-CGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732 | | || |||| || |||| ||| | || ||||| | || || || | | Sbjct 17322 CATATGATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGA 17381 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 | |||||||| || || || || |||| | | || || || || ||||| || Sbjct 17382 AGTAAATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGT 17441 Query 65793 TACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGAC 65852 | ||||| || |||| || |||| ||||| ||||| || || || ||||| || | Sbjct 17442 GGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGC 17501 Query 65853 GCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCA 65912 ||| |||||| || | || || || ||||| || ||||| |||||||| || || | Sbjct 17502 GCATATTGGATCGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAA 17561 Query 65913 AATTGCGTGTCACCACATGCACGATACGTCGC--AATTGTTCGAAATCAAAATGTTTAGG 65970 ||| || || | | ||| || | | | |||||||| | ||| Sbjct 17562 GATTCTTAGTAACAGTTTTGGC--TACTTCCTTTAGCTTTGCGAAATCATA-TGT----- 17613 Query 65971 ACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGAC 66030 ||||||||| | ||||||| || | ||||| || || ||||| || || Sbjct 17614 ACGATCGGGTTT---------CACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACAC 17664 Query 66031 AGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTAT 66090 ||| || || || | | || || ||||||||||||||||| || || || Sbjct 17665 AGCAATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGAT 17724 Query 66091 GGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGG 66150 || || | ||| || || |||||||| |||||||| ||||| ||||| | |||||| || Sbjct 17725 CGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGG 17784 Query 66151 AGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT 66210 || || ||||| || || || || || ||| ||| | | | ||||||| || Sbjct 17785 CACTCCAGTTTCAACCTGTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTG 17844 Query 66211 ACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCA 66270 ||| | ||| | ||| ||||| |||||| | |||||| |||||||| Sbjct 17845 ACGGGTGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCA 17904 Query 66271 TACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTC 66330 | || |||| | ||||| | ||| || ||||| || ||| | | ||| Sbjct 17905 TGTCTCCGACAATCCAGGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTC 17964 Query 66331 TACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTG 66390 ||||| |||| || | |||||| ||||| || |||||||| | || | ||| || Sbjct 17965 CACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGAC 18024 Query 66391 CTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATG 66449 ||| || |||| ||| || || | || | |||||||| | || ||||||||| Sbjct 18025 CTCTTCTTTGCCAGTG-TTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATG 18083 Query 66450 GTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAG 66509 | ||||| ||||| || || | || || ||| || |||||||| || || || | Sbjct 18084 GCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTG 18143 Query 66510 CGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGT 66569 | ||| ||| |||| |||| ||||||||| | ||||| || | ||||| || || Sbjct 18144 CAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTG 18203 Query 66570 CGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCT 66629 | || | |||| |||| || ||| |||||||| || || ||||| |||| | Sbjct 18204 CAATATATGTTCCTTTCGCCCTAATGCAGTGTACATTCAGGCCTATGCCACCAGCCGATT 18263 Query 66630 TCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGA 66689 | ||||| ||||| | | || | | || || || ||| || || | Sbjct 18264 TAGAGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACA 18323 Query 66690 TGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGG 66749 | || || ||| |||| || ||||| || | || || || | || | ||| | Sbjct 18324 TTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTG 18383 Query 66750 GTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAA 66809 | | ||||||||||||||| | |||| ||||||||||||||||| ||| ||||| Sbjct 18384 GCGAAGCGTGCGTAAAGTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAA 18443 Query 66810 TGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA 66869 | | ||| ||||| || |||| ||| ||||| || | || ||| |||| || || | Sbjct 18444 TATCTTCACCATGTATGCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAA 18503 Query 66870 GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | |||| || | | | || || | ||||| || |||| ||||||||| Sbjct 18504 TCTTCCCCTTAATTTTTAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTA 18558 >seq14 Length=264275 Score = 194 bits (214), Expect = 1e-44 Identities = 303/433 (70%), Gaps = 3/433 (1%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||||||||||||| | ||| |||||||| || ||||| ||||| | || | Sbjct 132540 TGTTCAATGCCATCGAGACGCTGCCGTGCGTGAAGCGTAAGGCGGACTGGGCGATGAACT 132481 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | ||||| | || || || | |||| || || | ||||||| Sbjct 132480 GGATCTCGAGCAAGAAGGCTAACTACGGCGAGCGTATCGTGGCGTTCGCAGCCGTCGAGG 132421 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 || | || |||||||| ||||| || ||||| ||| | ||||| ||||| || |||| Sbjct 132420 GTATCTTCTTCAGTGGCAGCTTTGCTGCCATCTTCTGGCTAAAGAAGCGTGGCCTGATGC 132361 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | |||||||| ||| ||| ||| |||| || ||||| || || | ||||| || |||| Sbjct 132360 CGGGTCTGACGTTCTCCAACGAGCTGATCTCGCGCGATGAAGGTTTACATTGCGACTTTG 132301 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | | | | ||||| |||||||| | || ||| | || || || | Sbjct 132300 CCTGTCTCATGTTCAAG---TATCTGGTACAGAAACCATCGCGCAAACGCGTAACGGATA 132244 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 | | ||||| || || | ||||| ||||| || ||||| | || |||| ||| Sbjct 132243 TCATCCGTGATGCAGTCATGATCGAGCAGGAGTTCCTGACGAAAGCACTGCCTGTCGATA 132184 Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 | | || |||||||| | || ||||||||||| || || || || || || ||||||| Sbjct 132183 TGTTGGGTATGAATTGCGAGCTCATGTCGCAGTACATCGAGTTCGTGGCGGATCGTCTGT 132124 Query 61817 TGGTCGATTTGGG 61829 |||| || ||||| Sbjct 132123 TGGTGGAGTTGGG 132111 Score = 167 bits (184), Expect = 2e-36 Identities = 203/274 (74%), Gaps = 6/274 (2%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| |||||||| ||||||||||| || ||||| ||| | || || |||||||| |||| Sbjct 132903 AGGCCGAAGCTTCTTTCTGGACGGTCGAAGAGGTGGATCTCTCAAAGGACATGAAAGACT 132844 Query 61166 GGGAGCGTTTATCG--AGCG-GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 |||| || | | | || |||||| |||||||| || ||| | || ||||| | Sbjct 132843 GGGA---TTCACTGAAACCGAGTGAACGTCATTTCATCTCGCACGTGCTCGCCTTCTTCG 132787 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 | || ||||| ||||| || || || ||| | | ||||| ||| |||||||| || | Sbjct 132786 CTGCCTCGGATGGTATTGTGAACGAAAATCTGGTTGAACGGTTCAGCCAGGAGGTACAGG 132727 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 || ||||||| || |||||||| || |||||||| || ||||| || || ||| || | Sbjct 132726 TGACGGAGGCCCGCTGTTTCTATGGTTTCCAGATCGCGATGGAAAACGTACACAGCGAAA 132667 Query 61343 TGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||||| |||| ||||| || ||||| |||| Sbjct 132666 TGTACTCGCTTCTTATCGACACCTACATTCGGGA 132633 >seq196 Length=65403 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 54995 CTATGGACGGATAGCGGCACGTTCTGGACTCGCTTTTCGACACGCCATCGATGTGGGAGC 55054 ||| || ||| | ||| | ||||| ||||| || | | || |||||| || ||||| Sbjct 36912 CTACGGCCGGGTGGCGCCTCGTTCCGGACTGGCAGTGAAAAACTTCATCGACGTCGGAGC 36853 Query 55055 TGGTATCATTGACGAGGACTATCGCGGACCGATCGGTGTTATACTCTTCAATCACAGCGA 55114 || | ||||||| || ||||||||| |||||||| | || ||||| || |||| Sbjct 36852 CGGAGTAGTTGACGAAGATTATCGCGGAAACGTCGGTGTTGTGCTGTTCAACCATGGCGA 36793 Query 55115 TGTACCGTTTGTCGTCAACATTGGTGATCGTATCGCCCAACTCAT 55159 | | | || | ||||| | || ||||||||||||||| |||| Sbjct 36792 GGCAGCTTTCGAGGTCAAGAAGGGCGATCGTATCGCCCAATTCAT 36748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397557243300800