Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq914 116 6e-24 seq779 80.6 5e-13 seq957 77.0 6e-12 >seq914 Length=3325 Score = 116 bits (128), Expect = 6e-24 Identities = 69/72 (96%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 146 GCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGT 205 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 3325 GCCGACATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGT 3266 Query 206 TATCCCTGTGGT 217 ||||||||| || Sbjct 3265 TATCCCTGTAGT 3254 >seq779 Length=290474 Score = 80.6 bits (88), Expect = 5e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 ||||||||||||| |||||| ||||| |||||| |||||||||||||||||||||| Sbjct 175836 GGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGACATCG 175777 Query 156 AAGGATC 162 | ||||| Sbjct 175776 ACGGATC 175770 >seq957 Length=114283 Score = 77.0 bits (84), Expect = 6e-12 Identities = 47/50 (94%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1691 AAAGTCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCCTGT 1642 Score = 73.4 bits (80), Expect = 7e-11 Identities = 68/84 (81%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG--AGGGAC 255 |||||||||||||||||||||||||||||| ||||||| | || |||| ||| | | Sbjct 55240 AAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG-CTAAAATCTCGTTATAACC 55298 Query 256 TAAAGGATCGATAGGCCACACTTT 279 ||||||||| |||||| |||| Sbjct 55299 AAAAGGATCGTAAGGCCAAGCTTT 55322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854389183296