Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28]
1,266 sequences; 216,307,690 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq649 333 8e-89
>seq649
Length=23666
Score = 333 bits (368), Expect = 8e-89
Identities = 369/481 (77%), Gaps = 26/481 (5%)
Strand=Plus/Minus
Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102
||||| | ||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 4324 TATTTCTCGTCACTACCTCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 4265
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 4264 TTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA 4205
Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222
||||| | |||||||||| || ||| |||||||| | ||||||||||||||| ||| |
Sbjct 4204 CCCGTCGCAACCATGGTAGTCCTCTACACTACCATCAATAGTTGATAGGGCAGACATTCG 4145
Query 223 AATGAACCATCGCCGG-CTCAAGGCCATGCGAT-----TCGTTA-----AGTTATTATGA 271
| || | ||| ||| | |||| || | |||| || ||| | || | |
Sbjct 4144 AGAGATCTGTCGTCGGTCGCAAGACCGTACGATCGGCATCATTATCCAGACTTCAACTCA 4085
Query 272 ATCACCAAGGAGCCCCGAAG---GGCG-TTGGTTTTTTATCTAATAAATACACCCCTTC- 326
|| || | | | | ||| | ||| |||| ||| ||||||| | |||| | |
Sbjct 4084 ATGAC--ACGGGGCACGAGGCCCCGCGATTGG---TTTGACTAATAAGTGCACCAGTCCC 4030
Query 327 -CGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGT 384
||| ||| || ||| |||||||||||||||||| || |||| |||||||| || | |
Sbjct 4029 GCGAGGTCCTGGCATTTTGCATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTAACT 3970
Query 385 AAGGT-ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443
|||| | ||| |||| ||| ||| | || |||||| | || ||||||| || |
Sbjct 3969 TAGGTGATGATCTCGTAAATTATAGCTGTTATACTGAGCCTTATGCGGTTTCACATTAAA 3910
Query 444 GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
| || || |||||||||||||||||||||| ||||||||| ||| ||| | |||||| |
Sbjct 3909 TA-TGTTTGTACTTAGACATGCATGGCTTAACCTTTGAGACGAGCGTAT-ATTACTGGTA 3852
Query 504 G 504
|
Sbjct 3851 G 3851
Score = 138 bits (152), Expect = 3e-30
Identities = 84/89 (94%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102
||||| | ||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 22002 TATTTCTCGTCACTACCTCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 22061
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCC 131
||||||||||||||| |||||||||||||
Sbjct 22062 TTGGATGTGGTAGCCATTTCTCAGGCTCC 22090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510380878336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |