Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq649 333 8e-89 >seq649 Length=23666 Score = 333 bits (368), Expect = 8e-89 Identities = 369/481 (77%), Gaps = 26/481 (5%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 4324 TATTTCTCGTCACTACCTCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 4265 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 4264 TTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA 4205 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| | |||||||||| || ||| |||||||| | ||||||||||||||| ||| | Sbjct 4204 CCCGTCGCAACCATGGTAGTCCTCTACACTACCATCAATAGTTGATAGGGCAGACATTCG 4145 Query 223 AATGAACCATCGCCGG-CTCAAGGCCATGCGAT-----TCGTTA-----AGTTATTATGA 271 | || | ||| ||| | |||| || | |||| || ||| | || | | Sbjct 4144 AGAGATCTGTCGTCGGTCGCAAGACCGTACGATCGGCATCATTATCCAGACTTCAACTCA 4085 Query 272 ATCACCAAGGAGCCCCGAAG---GGCG-TTGGTTTTTTATCTAATAAATACACCCCTTC- 326 || || | | | | ||| | ||| |||| ||| ||||||| | |||| | | Sbjct 4084 ATGAC--ACGGGGCACGAGGCCCCGCGATTGG---TTTGACTAATAAGTGCACCAGTCCC 4030 Query 327 -CGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGT 384 ||| ||| || ||| |||||||||||||||||| || |||| |||||||| || | | Sbjct 4029 GCGAGGTCCTGGCATTTTGCATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTAACT 3970 Query 385 AAGGT-ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443 |||| | ||| |||| ||| ||| | || |||||| | || ||||||| || | Sbjct 3969 TAGGTGATGATCTCGTAAATTATAGCTGTTATACTGAGCCTTATGCGGTTTCACATTAAA 3910 Query 444 GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 | || || |||||||||||||||||||||| ||||||||| ||| ||| | |||||| | Sbjct 3909 TA-TGTTTGTACTTAGACATGCATGGCTTAACCTTTGAGACGAGCGTAT-ATTACTGGTA 3852 Query 504 G 504 | Sbjct 3851 G 3851 Score = 138 bits (152), Expect = 3e-30 Identities = 84/89 (94%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 22002 TATTTCTCGTCACTACCTCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 22061 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCC 131 ||||||||||||||| ||||||||||||| Sbjct 22062 TTGGATGTGGTAGCCATTTCTCAGGCTCC 22090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510380878336