Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq391 466 1e-126 seq302 387 1e-102 >seq391 Length=2819257 Score = 466 bits (516), Expect = 1e-126 Identities = 1225/1851 (66%), Gaps = 49/1851 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||||||||||||||||||||| | || | |||||| | | |||||||||||| ||| Sbjct 157519 TCGACCGTGAACTGGATCGCATTTACGGCGGGCTTGGTGCGCAAATAGTACATGCCAGTC 157460 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || ||||| ||| || | ||| ||||| || | | || | || ||||| || Sbjct 157459 TTCAGGCCCATCTTCCACGCGTGGAAGTGCATTGACGTCAGCTTGCCGTAGTTCGGTTCC 157400 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 ||||| || || || |||||||| |||||||||| |||| ||| || || || ||||| Sbjct 157399 GCCACGTGGATGTTGAACGACTGCGACTGATCGATG-AACGCACCCCGGTCGGCTGCCAT 157341 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| || |||| |||||||| || || |||||||| || || || Sbjct 157340 CTGGATGC-ACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTTCCT 157282 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTG---CAATAATGCGATTACGCA 65372 | || || | || |||| ||||| ||||| | ||| || | || | || || Sbjct 157281 TCGGTATTTGTTCGATGTTCTGGATCGAACC--GTTGTGGGCCAGGATTGTG-TTCTTCA 157225 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 | || ||||| ||| | | |||| | | || ||| | || | || | Sbjct 157224 TATCATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCACCACCT 157165 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 | |||||||| ||||| || || ||| |||| |||||||||| || || || || | Sbjct 157164 GAAACTCGCCCGACAGAACGCGCCGGTTGTAGACGTTGGACGTGTACGGCTCGAACGACT 157105 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| | |||||| || || || || || ||||| || |||| || || ||||| Sbjct 157104 CGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGT 157045 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAAT-TCGTCCCAGTTCCACATCGGTTTA 65611 | |||| |||| | |||| || | || ||| |||| ||||||| ||| Sbjct 157044 TGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCG-CCCAATTCCACA--GGTC-- 156990 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 ||||| | || | |||||| || | ||||| | || | || |||| || || Sbjct 156989 -CGTCGGTA-CCTTGTTCCACATGTCGTACTGCAGAATACCCTTGCTCACCGGAGATCCT 156932 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 | | | |||||| |||||||| ||| | | ||||| | || || || || Sbjct 156931 TCGTACGTCTCGTACGGTCCCTCCTGAGCGGCCATCTCGCAGCTAGCTTCCAGCGCACCA 156872 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791 | || |||||||| || || | |||| || | | ||||| | ||||||||||| Sbjct 156871 TAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTTTGCGCCTCCGCACTCTCGTACGGG 156812 Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 | ||||||| || || | || |||| ||| || || || |||||||| ||||| || Sbjct 156811 AAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGGTGG 156752 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| || || || |||| || || || |||||| | || | |||||||| ||| Sbjct 156751 CGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGTCGATAATCTTGTTC 156692 Query 65912 AAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAG 65969 || ||||| ||||| | | | ||| || || | |||||||| | | Sbjct 156691 AAGTTGCGCGTCACGATTTTGGC--TACCTCTTTCAGCTTCGCGAAATCATAC------G 156640 Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029 ||| ||||| | |||| ||| || || |||| || || |||||||| | Sbjct 156639 TACGGTCGGG----CTGGACG-----AACATGTTCAGCGCAATCGAGGCCAGGTTGCACA 156589 Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089 | || | ||||| | | ||||| ||||| |||||||| || ||| ||| | Sbjct 156588 CCGCCACTTCGTCCTTCGACGAGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGA 156529 Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149 ||||||| | || ||||| || || ||||||||||| || |||||||||| |||||||| Sbjct 156528 TGGTGCCGATGTTTTGTTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACG 156469 Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC- 66208 | ||| ||||| || ||||| || ||||| || ||| ||| | | ||||| ||| Sbjct 156468 GTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGATCCTGCGCCTTTACCT 156409 Query 66209 ---GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265 | | | | || || ||||| || ||| ||| | | ||||| ||| Sbjct 156408 GGCGGATGAAGCGGCCCTCCTTT----TCATAACCCGTGTACAACTTCTCGAACTCTTCG 156353 Query 66266 CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCC 66325 ||||| |||| || | ||||| | ||| || ||||||| ||| | | | Sbjct 156352 CCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTC 156293 Query 66326 TGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385 || || || |||| || ||||| ||||||||||| ||||| || | || | ||| Sbjct 156292 GCCTCCACGCGCTGCATGAACAGATCCGGTATCCAGAGCGCGTAAAACATGTCCCTTGCG 156233 Query 66386 CGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445 || |||||| ||||| ||||| || || | |||||||| | ||| | ||| Sbjct 156232 CGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCTAAAAACTCAAACACATCGCCGTGC 156173 Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505 || || |||||||||||||| |||| || || || ||| || || |||||||| Sbjct 156172 CACGGCTCCAGGTAGATGGCAAACGCACCTGGCCGCTTATTGCCGCCCTGATCGACGTAC 156113 Query 66506 CGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTG 66565 || || ||||||| | || |||| ||||||||| | |||||| || | || || ||| Sbjct 156112 CGTGCCGTATTGTTGTACACGCGCAGCATCGGTACCAACCCGTTCGAAATTCCGTTCGTG 156053 Query 66566 CCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 || |||| | ||| ||||| || ||| || ||||| || || ||||||||| Sbjct 156052 CCAGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCGGCC 155993 Query 66626 GTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCC 66685 | ||| ||||| || || | || || | | ||||| || ||| ||| | Sbjct 155992 GACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCG 155933 Query 66686 TTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGG 66745 |||||||| || |||| || || ||||| | ||||| |||| ||| | | Sbjct 155932 GACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTGGCCGCCGCGAACATG 155873 Query 66746 GTGGGTGTAGCGTGCGTAAAGTAATG--GCGAGACATGTAATTGTACGTCTCGATGACAG 66803 || || | ||| || ||||||||| | ||||| | ||||||||||||||| | | Sbjct 155872 GTCGGCGAAGCATGGGTAAAGTAACGCTCCGAGAGCAG--ATTGTACGTCTCGATCGCTG 155815 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTT 66863 | || |||| ||| || || |||| || |||||||| | | || |||| | Sbjct 155814 CCTCGATGTCCGTGCCGTGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCT 155755 Query 66864 CGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 |||| | | ||||||| | || || || || || |||||||| |||| Sbjct 155754 CGACAATCTTGCCCTTGATCTTCAACAAATACGAACGCTCCAGGGTTTTGA 155704 >seq302 Length=5740867 Score = 387 bits (428), Expect = 1e-102 Identities = 524/727 (72%), Gaps = 9/727 (1%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||||||||||||||||||||| ||||| ||||| || | || || |||||||| |||| Sbjct 73572 AGGCGGAAGCTTCCTTCTGGACCGTGGAAGAGGTGGACCTCTCGAAGGACATGAAGGACT 73513 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 |||| || | | |||||| | | || ||||| || ||| |||| ||||||| Sbjct 73512 GGGATTCGCTGAAGCCGAGCG---AGCGTCACTTCATCTCGCACGTGCTGGCCTTCTTTG 73456 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| |||||||||||||| || |||||| | |||| || ||| ||||||||||| | Sbjct 73455 CCGCCTCGGACGGTATCGTGAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGG 73396 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 || ||||||| || || |||||||| || |||||||| |||||||| || ||| |||| Sbjct 73395 TGACGGAGGCTCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGCGAGA 73336 Query 61343 TGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCA 61402 ||||| | || ||||| |||||||| | || | | ||| || || |||||| Sbjct 73335 TGTACTCGCTGCTGATCGACACGTACATTCGCGACCCGAAGGAGCGGGAGTACCTGTTCA 73276 Query 61403 ATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCA 61462 | || ||||| ||| | ||| |||||| ||| || || ||||| | || |||||| Sbjct 73275 ACGCGATCGAAACGCTCCCGTGCGTGAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCT 73216 Query 61463 CCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTAT 61522 | || | ||| | ||||| || ||| || |||| || || | |||||||| | | Sbjct 73215 CGAGCAAGCAGGCCAACTTTGGCGAGCGAGTGGTGGCGTTCGCTGCCGTCGAGGGCATCT 73156 Query 61523 TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTC 61582 | ||||||||| || || || ||||| ||| ||||||| ||||| || ||||| |||| Sbjct 73155 TCTTCAGTGGAAGCTTCGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGTC 73096 Query 61583 TGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTT 61642 |||| ||| || |||||||| || || |||||||| |||| ||||||||||| Sbjct 73095 TGACGTTCTCGAACGAGTTGATCTCGCGTGACGAGGGACTGCACTGTGATTTTGCCTGCC 73036 Query 61643 TGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTC 61702 || | ||| |||||||||||| | ||| || ||||||| ||| || || | | Sbjct 73035 TGATGTTC---CGCTATCTGGTGCAGAAGCCGACGAAGGAGCGCGTGACGGAAATCATCC 72979 Query 61703 GTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCG 61762 | || ||||| | ||||| ||||| || ||||| | || | || || | ||| Sbjct 72978 GCGATGCGGTCGCAATCGAGCAGGAGTTCCTGACGAAGGCGCTCCCGGTTGATATGCTCG 72919 Query 61763 GCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG 61822 | ||||| || | || ||||||||||| || || || || ||||| || || || | | Sbjct 72918 GTATGAACTGCGATCTGATGTCGCAGTACATCGAGTTCGTGGCCGATCGGTTGCTGCTGG 72859 Query 61823 ATTTGGG 61829 | ||||| Sbjct 72858 AGTTGGG 72852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397561865774240