Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq712 129 2e-24 seq391 95.1 5e-14 >seq712 Length=12093160 Score = 129 bits (142), Expect = 2e-24 Identities = 231/334 (69%), Gaps = 14/334 (4%) Strand=Plus/Plus Query 626197 CATCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGA 626256 |||||| |||| ||| ||||| ||| | ||||| | ||| ||||| | ||| |||||| Sbjct 8711287 CATCGACTGGGCGGAGTACTTCATGGCGATGGCCTTCCTCGCGGCCAAACGCAGCAAGGA 8711346 Query 626257 CCCCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGG 626316 || ||| |||||||| ||||||||||| |||||||| ||||| ||||| || || Sbjct 8711347 TCCGTCCACGCAGGTCGGTGCCTGCATCGTGAACGAGGAAAAGCGTGTCGTCGGCATCGG 8711406 Query 626317 CTACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGGAAGCGCGATAGCGC 626376 |||||||| || ||| ||||||| || |||| ||||| ||| ||| | || Sbjct 8711407 GTACAACGGTTTTCCGACCGGCTGCAGCGATGACGAGTTTCCCTGG----TCGAAAACGT 8711462 Query 626377 ATGTGAGGACATTCTCGACAGCAAGAGCCTCTATGTGGTTCACGCCGAACTCAACGCCAT 626436 || | || || || | ||| || || ||| |||||||||| | ||||| || Sbjct 8711463 CGGTCA--ACCCACTGGAGACGAAGTATCTGTACGTGTGTCACGCCGAAGTGAACGCGAT 8711520 Query 626437 CCTCAACAAGAACGCCAAGT--CTA--TCAAGGGCTGCACTGTCTACGTCACTCTCTTTC 626492 || ||||| ||| ||| | | | ||| |||||| | || || | || |||| Sbjct 8711521 ACTGAACAAAAAC----AGTACCGACGTGAAGAACTGCACGATGTATGTGGCGCTGTTTC 8711576 Query 626493 CATGTTGCGAATGTACCAAGGCCATCATCCAGTC 626526 | || ||| || | ||| |||||||||||| Sbjct 8711577 CGTGCAACGAGTGCGCGAAGATCATCATCCAGTC 8711610 >seq391 Length=2819257 Score = 95.1 bits (104), Expect = 5e-14 Identities = 122/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 21728 GATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAA 21787 ||||| || ||||| ||||| || | ||| | ||||||||| || ||||||||||| Sbjct 1161904 GATGAACTGCGCGATACGATCACCCTTCTTCACCTCAAAGTCCGCCTCGGAGTGGTTGAA 1161963 Query 21788 GAGCACCACCCCGACCTTGCCCCTATAAGAACT-GTCGACGACCCCGGCGCCGACGTCGA 21846 ||||| || ||||| || || | | || || ||||||||| ||||| || || |||| Sbjct 1161964 CAGCACGACGCCGACATTTCCACGGT-AGTCCTCGTCGACGACGCCGGCACCCACATCGA 1162022 Query 21847 GCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTA 21892 |||||||| ||||| || |||| || || || || ||||| Sbjct 1162023 TGAAGTTCTTCACCGCCAGCCCGGATCGTGGTGCCACACGTCCGTA 1162068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084704559452268