Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq313 104 2e-18 >seq313 Length=5067560 Score = 104 bits (114), Expect = 2e-18 Identities = 257/386 (67%), Gaps = 18/386 (5%) Strand=Plus/Minus Query 6214 ATTGGATTAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCACTTATG 6273 || ||| || || |||||| | |||| || ||| || ||| | || ||||| || ||| Sbjct 3837896 ATAGGACTACGACCAAAAGCGAGAGAGCTAAAACTAGTCGGACGATTTTTTGCTCTCATG 3837837 Query 6274 TCTTGGGAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGTA 6333 || |||| | | ||||| || ||||| || |||||| || || || || ||| | Sbjct 3837836 TCCTGGGCATTAAGAGAGTACTTTGTTATCACAGAGCTACTGATTAAGCGCCATTTTTTT 3837777 Query 6334 CCTCTGTTCAAAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAAATTTTA 6393 || ||| |||||||||||| |||||||| ||| | |||| ||| ||| | | Sbjct 3837776 CCCTTGTGCAAAGGTCTGACGATGGCAGATGATAACAATACTG---TCGTAAA----TAA 3837724 Query 6394 GAGAATACAGAG----GGACAAGGAGAAACA-----GGGTATGAGAATATCACGGTTTCA 6444 || | || || ||| | | || || || ||||| | | || || | Sbjct 3837723 GATGCTTCA-AGCCTCGGA-ATATAAAAGCACTCATGGATATGATCAAGTTACCATTGCT 3837666 Query 6445 AACCATATAGATTACGAGAAATGGAACAACCACCAAAGGAAAGAGGCCAATAATCCTGTG 6504 || ||| | |||||| ||||||||||| |||| |||||||| || ||| ||||||| Sbjct 3837665 AAACATGTCGATTACACTAAATGGAACAATTACCAGAGGAAAGAAGCTAATGATCCTGTT 3837606 Query 6505 TTTGATGTAATGGGGAAATTCCTTGGCTACCCCAACCTTATCTCACGTACCCATGAAATA 6564 || ||||||||| || || | || ||||| | | ||||||||||| | Sbjct 3837605 TTCCGTGTAATGGGCAATTTTATGGGAATGGAGAACCTGTTTTGTCGTACCCATGAGTTC 3837546 Query 6565 TTCGAAAAGTCCTGGATGTATTATAA 6590 || |||| |||| | |||||||| Sbjct 3837545 TTTGAAAGTTCCTTCTTTTATTATAA 3837520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35548293696216