Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_033731.1 Length=12548 Score E Sequences producing significant alignments: (Bits) Value seq313 129 5e-26 >seq313 Length=5067560 Score = 129 bits (142), Expect = 5e-26 Identities = 288/425 (68%), Gaps = 18/425 (4%) Strand=Plus/Minus Query 6230 GTAATAGGTCTAAGAGCTAAAGAAAGAGAATTAAAATTAACAGGGAGGTTTTTTGCTTTA 6289 |||||||| ||| || | |||| ||||| ||||| || || | ||||||||| | Sbjct 3837899 GTAATAGGACTACGACCAAAAGCGAGAGAGCTAAAACTAGTCGGACGATTTTTTGCTCTC 3837840 Query 6290 ATGTCTTGGGAGTTGAGAGAGTATTTTGTTATAACTGAGTGGCTCATAAAGAAGTATTTC 6349 ||||| |||| || |||||||| |||||||| || ||| || || ||| |||| Sbjct 3837839 ATGTCCTGGGCATTAAGAGAGTACTTTGTTATCACAGAGCTACTGATTAAGCGCCATTTT 3837780 Query 6350 GTTCCGTTACTAAGAGACTTAACAATGGCAGACGACTTGAATGATGTCATAAGTAAAATG 6409 |||| || | || | || |||||||| || ||| |||| ||| ||| ||| Sbjct 3837779 TTTCCCTTGTGCAAAGGTCTGACGATGGCAGATGATAACAATACTGTCGTAAATAAGATG 3837720 Query 6410 TT----GTCTAG---TACATCAGGACA-AGGGTTGGATGACTACTCAGTAGTATCTATTT 6461 | | || | || | || || | || | |||| ||| ||| | ||| Sbjct 3837719 CTTCAAGCCTCGGAATATAAAAGCACTCATGGAT--ATGA----TCA--AGTTACCATTG 3837668 Query 6462 CTAACCACTTAGATTACGAGAAATGGAACAATCACCAAAGGAAGGAATCAAATGATCCTG 6521 |||| || | |||||| |||||||||||| |||| ||||| ||| | |||||||||| Sbjct 3837667 CTAAACATGTCGATTACACTAAATGGAACAATTACCAGAGGAAAGAAGCTAATGATCCTG 3837608 Query 6522 TATTCAGAGTGATGGGTCAATTTT-TGGGAAAGCCTAACTTATTCACTAGGACACATGAG 6580 | ||| | || ||||| ||||||| |||||| | ||| | || | | || |||||| Sbjct 3837607 TTTTCCGTGTAATGGG-CAATTTTATGGGAATGGAGAACCTGTTTTGTCGTACCCATGAG 3837549 Query 6581 TTTTTCGAGAAATCGTTGATTTATTATGTTGATAGACCTGATTTGATAAGAGTAGATGAG 6640 || || || | || || |||||||| ||| ||| || |||| | |||||| || Sbjct 3837548 TTCTTTGAAAGTTCCTTCTTTTATTATAAAGATCAGCCTAATCTGATGATAGTAGAAGAT 3837489 Query 6641 GAGAA 6645 | ||| Sbjct 3837488 GGGAA 3837484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40037829753088