Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq792 300 5e-79 seq707 118 3e-24 >seq792 Length=17967 Score = 300 bits (332), Expect = 5e-79 Identities = 352/473 (74%), Gaps = 27/473 (6%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 12156 TATTTCTCGTCACTACCTCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 12097 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 12096 TTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA 12037 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| | |||||||||| || ||| |||||||| | ||||||||||||||| ||||| Sbjct 12036 CCCGTCGCAACCATGGTAGTCCTCTACACTACCATCAATAGTTGATAGGGCAGACATTTG 11977 Query 223 AATGAACCATCG-CCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAAT--CACCAA 279 || || | ||| | | | || |||| |||| | |||| || | || | Sbjct 11976 AAAGATCTGTCGTCAGTCGTGAGACCATACGATCGGCATCCTTATCCAGACTTCAACTCA 11917 Query 280 GGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG----------- 328 | |||| ||| |||| |||| ||||||| | |||| ||||| Sbjct 11916 AAACACCCGGAGGCGATTGG---TTTAACTAATAAGTGCACCAGTTCCGCCAGCCCGGAG 11860 Query 329 -----AAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA- 382 |||| || | | ||||||||||||||| | || |||| |||||||| ||| Sbjct 11859 GCCAACAGTCCCGGCATGTTGCATGTATTAGCTCTGGCTTTTCCACAGTTATCCAAGTAA 11800 Query 383 --GTA-AGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439 ||| || | ||| ||| ||| ||| | || |||||| | || ||||||| Sbjct 11799 CTGTAGGGGGATGATCTTGCAAATTATAGCTGTTATACTGAGCCTTATGCGGTTTCACAT 11740 Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 || | || || |||||||||||||||||||||| ||||||||||||| ||| Sbjct 11739 TACTTA-TGTTTGTACTTAGACATGCATGGCTTAACCTTTGAGACAAGCGTAT 11688 >seq707 Length=3970 Score = 118 bits (130), Expect = 3e-24 Identities = 84/95 (88%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||||||||| ||||||||||||| |||||||| |||| |||||| |||||||||||| Sbjct 432 ATTGGGTAATTTTCGCGCCTGCTGCCGTCCTTGGACGTGGCAGCCGTCTCTCAGGCTCCC 373 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGT 167 |||||||||||| | | ||| | ||||||||||| Sbjct 372 TCTCCGGAATCGGA-CAAAATCCTCCGTTACCCGT 339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510359627008