Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1391 430 1e-115 seq2119 217 1e-51 >seq1391 Length=279726 Score = 430 bits (476), Expect = 1e-115 Identities = 1217/1849 (66%), Gaps = 49/1849 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || ||||| || ||||||||||| |||||| |||||| | | ||||||||||| || Sbjct 1693 TCCACCGTAAATTGGATCGCATTCACAGCCGGCTTGGTGCGCAAGTAGTACATGCCAGTT 1752 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || |||| | || ||||| ||||| | | || |||| || |||||| Sbjct 1753 TTCAATCCCATCTTCCAACCGTAAAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCG 1812 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCCAT 65256 || || || || || ||||| || ||||||||| |||| || ||||| || ||||| Sbjct 1813 GCGACGTGAATGTTGAACGATTGCGACTGATCGATA-AACGCTCCCCGATCCGCTGCCAT 1871 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| || |||||||||||||||| || ||||||||| |||| || Sbjct 1872 TTTGATGC-ACGTTTTCACCGATATCTCCCAGACCGTTTTGTACAGGTCGCGTATTTCCT 1930 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGAT-TACGCAT 65373 || || |||| || | || | || ||| | | || | | || | | | | Sbjct 1931 GCGGTATAGCCTCTATCTTTTGAATCGACCCATTGTTGGACAGAATTTCGTTCTTCATGT 1990 Query 65374 CGAC-TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 ||| || |||||| |||| | | |||| || | || || | || | || | Sbjct 1991 CGAGATC---CCACAAGCCCATGTTAGTTAGATCCTGCAGCAGATGGTGGTTCACCACCT 2047 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| ||||| || || | | || | ||| || ||| || || || |||| Sbjct 2048 GGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATGTGTACGGCTCGAACGATT 2107 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || | ||||| || ||||||||||| || || || ||||| ||||| | || ||| |||| Sbjct 2108 CATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCCAACAGCAACGAGT 2167 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612 | || | |||| | | |||| || | ||| || |||||||||| | | | Sbjct 2168 TGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCCAGTTCCATAGAG-----T 2222 Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672 ||| | | ||| | |||||| || | |||||| | || | || |||| || Sbjct 2223 CGTAGGC-TCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTTACCGGGCTGCCCT 2281 Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732 | | | |||||| ||| || ||| | | ||||| | || || || || Sbjct 2282 CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAGCTTCCAGCGCTCCAT 2341 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 | || ||||| ||||| || || | || |||| | ||||| ||||| |||||||| | Sbjct 2342 AGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTCGCTTTCGTACGG-A 2400 Query 65793 TACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || | ||||| || || | ||||||| || || || || || |||||||| | || Sbjct 2401 TAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGTCTGTGG 2460 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| ||||| || | ||||| || ||||||||||| || | || || || ||| Sbjct 2461 CGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGTCAATGATTTTGTTC 2520 Query 65912 AAATTGCGTGTCACCACATGCACGA--TACGTC-GCAATTGTTCGAAATCAAAATGTTTA 65968 | |||||||||||| | | | | | | || || || | |||||| | Sbjct 2521 AGATTGCGTGTCACTATTTTGGCCACTTCCTTCAGC-----TTAG----CAAAATCGT-- 2569 Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 ||| | | ||| || ||| || || |||| || || || ||||| Sbjct 2570 --ACGTTTTGTCCTGCTTTACG-----AACATGTTCAGCGCAATCGAGGCTAGATTGCAC 2622 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 || ||||| ||||| | | ||||| ||||| ||||||||||| || || Sbjct 2623 ACCGCTATTTCGTCCTTGGACGAGTACTCCACAATCTCGGTGCACAGGTTGGAACACTTG 2682 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 |||||||| | ||||| ||||| ||||| ||||| || ||||||||||||| ||||||| Sbjct 2683 ATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACAGCATGTAC 2742 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || || || ||||| || ||||| ||||| || ||| || | | ||||||||| Sbjct 2743 GGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCGCCTTCACC 2802 Query 66209 GTACGTAC----CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264 || | || || |||| ||| | ||| | || | ||||| ||| Sbjct 2803 TGTCGAATAAAGCGACCCTCCTTCTCGTACCCCGTGTAC----AGCTTCTCGAACTCTTC 2858 Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324 ||||| |||| || | ||||| | ||| ||||||||||| ||| | | Sbjct 2859 GCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATTTCGTT 2918 Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384 | || ||||| ||| || ||||| ||||||||||||||||| || | || || || Sbjct 2919 CGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGC 2978 Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG-TCGAGGAACTCAAAGATGTCGGCAT 66443 ||| ||| || ||||| | |||| | ||| ||||| ||||| || || || | | Sbjct 2979 TCGCACCTCTTCTTTGCCG-GTGTTTTTCTTAAGATCGAGAAACTCGAATATATCTCCGT 3037 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||| || || || ||||| ||||||| || |||||| |||||| |||||||| | Sbjct 3038 GCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCGACAT 3097 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 | || || ||||||| | || ||||||||||| || || ||||| || | || || | Sbjct 3098 ACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCG 3157 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 | || ||| | ||| || || || ||| || ||||| ||||||||||||| Sbjct 3158 TACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGGCCAATACCACCGG 3217 Query 66624 CCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCAC 66683 | | || || || ||||| | | || | | || || || || |||| Sbjct 3218 CAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTCAT 3277 Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743 | |||||||| || | || ||| || ||||| | ||||| |||| || | Sbjct 3278 CGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCGCAAACA 3337 Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803 ||| |||| ||| || || ||||| | |||| ||||||||| ||||| | | Sbjct 3338 TGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGATCGCTG 3397 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTT 66863 |||| |||| |||||| || || |||| || |||||||| | || || ||||| | Sbjct 3398 CATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTGGCCGCT 3457 Query 66864 CGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 |||| | | | ||||||| | || || || || ||||||| ||| || Sbjct 3458 CGACAATCTTACCCTTGATCTTCAGCAAATACGATCGTTCCAAGGTTTT 3506 >seq2119 Length=1501809 Score = 217 bits (240), Expect = 1e-51 Identities = 311/435 (71%), Gaps = 5/435 (1%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||| || |||||||| ||| | ||| |||||| ||| || || ||||| | || | Sbjct 1235237 TGTTTAACGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCACTGAACT 1235178 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | ||| | ||||| ||||| | |||| ||||| | || || | Sbjct 1235177 GGATCTCGAGCAAGAAGGCCAACTTTGGCGAACGGGTTGTGGCGTTTGCCGCCGTTGAAG 1235118 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 || | || ||||||||| || || ||||||| ||| ||||||| ||||| || |||| Sbjct 1235117 GTATCTTCTTCAGTGGAAGCTTCGCTTCAATCTTCTGGCTGAAGAAGCGTGGCCTGATGC 1235058 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | || || |||||| || ||| |||| || |||||||| || | || ||||| |||| Sbjct 1235057 CTGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTACACTGTGACTTTG 1234998 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | | || | ||||| |||||||| | |||||| ||||||| ||| |||| Sbjct 1234997 CCTGTCTGATGTTCAAG---TATCTGGTTCAGAAGCCGTCGAAGGAGCGCGTGACGGAGA 1234941 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 || | || || || || ||||| ||||| |||||||| | || ||||||| | || Sbjct 1234940 TTATCCGCGATGCTGTCGTGATCGAGCAGGAGTTTCTGACGAAGGCACTGCCCGT-TGAC 1234882 Query 61757 -TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 | |||||||||| |||| || ||||||||||| || || ||||| || || ||| || Sbjct 1234881 ATGCTCGGCATGAACTGTGATCTGATGTCGCAGTACATCGAGTTTGTGGCGGATCGTTTG 1234822 Query 61816 TTGGTCGATTTGGGT 61830 || |||| ||||| Sbjct 1234821 CTGCTCGAGCTGGGT 1234807 Score = 203 bits (224), Expect = 3e-47 Identities = 208/269 (77%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 ||||||||||||| |||||||||||||||||||||||| ||||||| || ||||| || | Sbjct 1235600 AGGCGGAAGCTTCGTTCTGGACGGTGGAGGAGGTCGATCTGTCCAAGGATATGAAGGATT 1235541 Query 61166 GGGA-GCGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 |||| ||| | | |||||| | | || || || || ||| | || ||||||| Sbjct 1235540 GGGATGCGCTGAAACCGAGCG---AGCGTCACTTTATCTCTCACGTGCTTGCCTTCTTTG 1235484 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 | || || || || ||||| || || ||| | ||||||| ||| ||||||||||| | Sbjct 1235483 CTGCGTCCGATGGCATCGTGAACGAAAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGG 1235424 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | |||||||||| || |||||||||||||||||||| ||||| ||||| ||| |||| Sbjct 1235423 TAACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGA 1235364 Query 61343 TGTACAGTGTTCTCATCGATACGTACATC 61371 ||||| | || ||||| ||||||||| Sbjct 1235363 TGTACTCGCTGCTGATCGACACGTACATC 1235335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397555048352720