Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1668 107 8e-18 seq2011 102 3e-16 >seq1668 Length=996636 Score = 107 bits (118), Expect = 8e-18 Identities = 225/333 (68%), Gaps = 12/333 (4%) Strand=Plus/Plus Query 626197 CATCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGA 626256 |||||| |||| ||| | || ||| | |||| |||| | ||| ||||| |||||| Sbjct 378040 CATCGACTGGGCGGAATGTTTCATGGCGATGGCTTTTCTAGCCGCCAAGCGCAGCAAGGA 378099 Query 626257 CCCCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGG 626316 ||| || |||||||| || |||||||| ||||||||||| || |||| || || Sbjct 378100 TCCCTCAACGCAGGTCGGTGCGTGCATCGTGAACGAGGACAACCGTATCGTAGGCATCGG 378159 Query 626317 CTACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGGAAGCGCGATAGCGC 626376 |||||||| ||||| ||||||| |||||| | ||||| ||| | | | Sbjct 378160 ATACAACGGATTCCCCAAGGGCTGCAGTGACGATGAGTTTCCGTGG----TCTAAA---- 378211 Query 626377 ATGTGAGGACATT---CTCGACAGCAAGAGCCTCTATGTGGTTCACGCCGAACTCAACGC 626433 | || | |||| | ||||| | ||| ||| || ||| ||||| ||| | ||||| Sbjct 378212 ACGTCA-GACAATCCACTCGAAACAAAGTACCTGTACGTGTGCCACGCGGAAGTAAACGC 378270 Query 626434 CATCCTCAACAAGAACGCCAAGTCTATCAAGGGCTGCACTGTCTACGTCACTCTCTTTCC 626493 ||||| ||||| ||| | | | | |||||| | ||||| | || ||||| Sbjct 378271 AATCCTTAACAAAAACAGTACGGACGTGCGGAACTGCACCATGTACGTGGCGCTGTTTCC 378330 Query 626494 ATGTTGCGAATGTACCAAGGCCATCATCCAGTC 626526 || ||| ||| ||||| ||| ||||| || Sbjct 378331 CTGCAACGAGTGTGCCAAGATCATTATCCAATC 378363 >seq2011 Length=138812 Score = 102 bits (112), Expect = 3e-16 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 21735 TGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACC 21794 || |||||||| || || | ||| | ||| || ||| || ||||||||||| ||||| Sbjct 11479 TGTGCGATGCGGTCTCCTTTCTTCACTTCGAAATCCGTCTCCGAGTGGTTGAACAGCACA 11538 Query 21795 ACCCCGACCTTGCCCCTATAAGAACT-GTCGACGACCCCGGCGCCGACGTCGAGCCCGTT 21853 || ||||| || || | | || || ||||||||| ||||| ||||| |||| ||| Sbjct 11539 ACGCCGACGTTACCACGGT-AGTCCTCGTCGACGACACCGGCACCGACATCGATAAAGTT 11597 Query 21854 CTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAG 21893 ||||| |||||||| || | |||||| || ||||| ||| Sbjct 11598 CTTCACTGCCAGACCAGAACGGGGAGCTACCCGGCCATAG 11637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084666060834054