Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_032907.1 Length=13109 Score E Sequences producing significant alignments: (Bits) Value seq1544 86.0 5e-13 seq1310 82.4 6e-12 >seq1544 Length=1554 Score = 86.0 bits (94), Expect = 5e-13 Identities = 190/279 (68%), Gaps = 12/279 (4%) Strand=Plus/Minus Query 8185 CTTGTAATCGGGCTGAGAGGAAAGGAAAGAGAAATCAAAAGGATAGGTCGATTCTTCGCT 8244 || || ||||| |||||| ||| || | ||| | ||| | ||| | ||||||||| Sbjct 280 CTAGTGATCGGATTGAGAGCAAAAGAGCGGGAACTTAAACCTAAAGGGAGGTTCTTCGCT 221 Query 8245 CTTATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACAT 8304 || ||| ||| || ||||||| || | | ||||| | || || || |||| Sbjct 220 CTAATGAGTTGGTCTCTTCGAGATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACAT 161 Query 8305 TTCGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTA-AACACAG---TTGTTaa 8360 | || || || | |||||||||| ||||||||||| ||| || |||| | |||| Sbjct 160 ATAGTTCCCCTATGTACCGGATTAACCATGGCAGATGA-CTACAATACAGTCATAATTAA 102 Query 8361 aaaaaTGCTCGATACATCTAATGGAC--AAGGGTTAGACGTTTACGACTATATCACAATG 8418 || |||| | | |||| |||| || |||| ||| ||| | | || || Sbjct 101 AATGATGCAAGCTTCATC---AGGACAGAATACCTAGA--GTTATGACGAGGTAACCATC 47 Query 8419 GCAAATCATATAGATTATGAGAAATGGAATAACCATCAA 8457 ||||| ||| | ||||| ||||||||||||||| ||||| Sbjct 46 GCAAACCATGTTGATTACGAGAAATGGAATAACTATCAA 8 >seq1310 Length=1959 Score = 82.4 bits (90), Expect = 6e-12 Identities = 289/442 (65%), Gaps = 21/442 (5%) Strand=Plus/Minus Query 8264 GAGATTACTTCGTAATTACAGAATATTTAATTAAATTACATTTCGTCCCTCTCTTCTCCG 8323 ||||||| || | | ||||| | || || || |||| | || || || | ||| Sbjct 1950 GAGATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATAGTTCCCCTATGTACCG 1891 Query 8324 GATTAACTATGGCAGATGATCTA-AACACAGTTGT---TaaaaaaaTGCTCGATACATCT 8379 ||||||| ||||||||||| ||| || ||||| | ||||| |||| | | |||| Sbjct 1890 GATTAACCATGGCAGATGA-CTACAATACAGTCATAATTAAAATGATGCAAGCTTCATCA 1832 Query 8380 AATGGACA--AGGGTTAGACGTTTACGACTATATCACAATGGCAAATCATATAGATTATG 8437 ||||| | |||| ||| ||| | | || || ||||| ||| | ||||| | Sbjct 1831 ---GGACAGAATACCTAGAG--TTATGACGAGGTAACCATCGCAAACCATGTTGATTACG 1777 Query 8438 AGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAATCCTGTCTTCACTGTCATGGGTC 8497 |||||||||||||| ||||| | | || | |||| | || ||| || ||| |||| | Sbjct 1776 AGAAATGGAATAACTATCAACGTGCTGAAGGAAACGACCCCGTCCTCGAGGTCTTGGGAC 1717 Query 8498 AGTTTCTAGGATATCCAAGCCTCATAACAAGAACACATGAGTTCTTTGAAAAAAGCTTGA 8557 || | ||| || | | | || || || |||||||| |||| |||| Sbjct 1716 GATTCTTTGGACTGCCTAAATTGTTTGTGAGGACTCACGAGTTCTTCAAAAATTCCTTGT 1657 Query 8558 TCTATTACAACAACAGAACAGACCTAATGTATGTAAGAGATGGGGTT--GTTTTGAACAA 8615 ||||||| || | ||| | ||||| ||| ||| ||| || | | | ||| ||| Sbjct 1656 TCTATTATAAGGATAGACCTGACCTCATGGTTGT---AGAGGGTGATCAGATTT---CAA 1603 Query 8616 AGA-TGATGACACGCCTGTCTGTTGGAATGGTCAGGCCGGAGGACTAGAGGGGCTGAGAC 8674 | | | || | |||| ||| | ||| ||| || ||| ||||| | |||| Sbjct 1602 ACATTCCTGGGGAGTTCTTCTGATGGCAAGGTGAGGATGGGGGATGTGAGGGATTAAGAC 1543 Query 8675 AAAAAGGCTGGAGTATAGTCAA 8696 ||||||| |||||| |||| || Sbjct 1542 AAAAAGGGTGGAGTCTAGTTAA 1521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41829107166128