Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq1544 86.0 4e-13 >seq1544 Length=1554 Score = 86.0 bits (94), Expect = 4e-13 Identities = 201/301 (67%), Gaps = 2/301 (1%) Strand=Plus/Minus Query 6181 AATGACACAGGTATATCAGAAGATCATCTGATCATTGGATTAAGAGCAAAAGAGCGAGAA 6240 |||||||||||| || | || | | || | || ||||| |||||||||||||| ||| Sbjct 307 AATGACACAGGTTTAACCAAAAACGAACTAGTGATCGGATTGAGAGCAAAAGAGCGGGAA 248 Query 6241 CTTAAAGAAGAAGGAAGGTTCTTTGCACTTATGTCTTGGGAAATCAGAGATTATTTTGTG 6300 |||||| |||| |||||||| || || ||| |||| | ||||||||||| | Sbjct 247 CTTAAACCTAAAGGGAGGTTCTTCGCTCTAATGAGTTGGTCTCTTCGAGATTATTTTCTC 188 Query 6301 ATGACAGAGTATCTTATCAAAACACACTTTGTACCTCTGTTCAAAGGTCTGACAATGGCA 6360 | ||||||| | || || | ||| | || || || | | || | || |||||| Sbjct 187 TTAACAGAGTGCTTGATAAAGAGACATATAGTTCCCCTATGTACCGGATTAACCATGGCA 128 Query 6361 GACGATTTGACAACTGTAATCGGAAAAATTTTAGAGAATACAGAGGGACAAGGAGAAACA 6420 || || | | || || || ||||| | | | || |||| || | | | Sbjct 127 GATGACTACAATACAGTCATAATTAAAATGATGCAAGCTTCATCAGGAC-AGAATACCTA 69 Query 6421 G-GGTATGAGAATATCACGGTTTCAAACCATATAGATTACGAGAAATGGAACAACCACCA 6479 | | ||||| | | || | |||||||| | ||||||||||||||||| ||| | || Sbjct 68 GAGTTATGACGAGGTAACCATCGCAAACCATGTTGATTACGAGAAATGGAATAACTATCA 9 Query 6480 A 6480 | Sbjct 8 A 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35547731003148