Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq71 141 4e-31 >seq71 Length=24614 Score = 141 bits (156), Expect = 4e-31 Identities = 119/146 (82%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| ||||||||||| | ||||||||||||||| Sbjct 18009 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGAGGTAAACTCCTTCTAAAGCTAAAT 18068 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 18069 ATCACCATGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 18128 Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185 ||||||| ||| || |||||||| || Sbjct 18129 AGAGAGTCAAAGAGTACGTGAAACTG 18154 Score = 95.1 bits (104), Expect = 5e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 || |||||||||||||||||||||||||||| ||| ||||| ||| |||||| ||| || Sbjct 24528 TGTGACCCGAAAGATGGTGAACTATGCCTGATCAGGTTGAAGTCAGGGGAAACCCTGATG 24587 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAA 653 |||| || ||| ||||| ||||||| Sbjct 24588 GAGGACCGAAGCAATTCTGACGTGCAA 24614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079993350500