Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq71 129 9e-28 seq10 89.7 8e-16 >seq71 Length=24614 Score = 129 bits (142), Expect = 9e-28 Identities = 94/108 (87%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 16384 GTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 16325 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATC-TGTCCTCCCTC 265 ||||| |||| || | |||||||||||| |||| |||| | |||| Sbjct 16324 ACCACTACCCTTAATTTTGAGAAAGAGCTATTAATCTTGTCTTACCTC 16277 Score = 82.4 bits (90), Expect = 1e-13 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||| ||||||| |||||||||||||||||||||||| |||||||||| | ||| Sbjct 16612 CATTGTAGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCG-CTC- 16555 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| || || ||| | | ||| ||||| |||| || Sbjct 16554 AACCTCACTTTGCTAAACACAAATTGTCCCATTAAGCAG 16516 >seq10 Length=6084899 Score = 89.7 bits (98), Expect = 8e-16 Identities = 87/110 (79%), Gaps = 4/110 (4%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| | |||||||||||||||||||||||||||| ||||| |||||||||||| |||| Sbjct 620642 GTCACATTCGTTATCGGAATTAACCAGACAAATCGATCCACGAACTAAGAACGGTTATGC 620583 Query 219 ACCACCACCCATAG--AA--TCAAGAAAGAGCTATCAATCTGTCCTCCCT 264 ||| | | | | | || | |||||||||| |||||||| | | ||| Sbjct 620582 ACCTCTCCTCTTTGTTAAGTTTGAGAAAGAGCTCTCAATCTGACTTGCCT 620533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797607110