Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq71 361 2e-97 >seq71 Length=24614 Score = 361 bits (400), Expect = 2e-97 Identities = 373/478 (78%), Gaps = 20/478 (4%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 8908 TATTTCTCGTCACTACCTCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 8849 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 8848 TTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA 8789 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||||| |||||||||| || |||| |||||||| | ||||||||||||||| ||||| Sbjct 8788 CCCGTTGCAACCATGGTAGTCCTCTATACTACCATCAATAGTTGATAGGGCAGATATTTG 8729 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGAT-----TCGTTA---AGTTATTA--TGAA 272 || || | ||| ||| | || |||| |||| || ||| || | | | | || Sbjct 8728 AAAGATCTGTCGTCGGTGCGAGACCATACGATCGGCATCATTATCCAGATTTCAACTCAA 8669 Query 273 TCACCAAGGAGCCCCGAAGGGCG-TTGGTT-TTTTATCTAATAAATACACCCCTTC--CG 328 | || || || ||| ||||| || || ||| ||||||| | |||| ||| || Sbjct 8668 --AGCACGGCCCCGCGAGGGGCGCGTGATTGGTTTGACTAATAAGTGCACCAGTTCCGCG 8611 Query 329 AAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAA 386 | ||| || || |||||||||||||||||| || |||| |||||||| ||| | Sbjct 8610 AGGTCCTGGCAATTTGCATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTAACTTTG 8551 Query 387 GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT 446 | | ||| |||| ||| ||| | || |||||| | || ||||||| || | | Sbjct 8550 GCGATGATCTTGTAAATTATAGCTGTTATACTGAGCCTTATGCGGTTTCACATTA-ATGT 8492 Query 447 TGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| |||||||||||||||||||||| ||||||||||||| ||| | |||||| || Sbjct 8491 TGCTCGTACTTAGACATGCATGGCTTAACCTTTGAGACAAGCGTAT-ATTACTGGTAG 8435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510395317760