Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq4 105 3e-17 >seq4 Length=15719670 Score = 105 bits (116), Expect = 3e-17 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 626197 CATCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGA 626256 |||||| ||| ||| ||||| ||| | ||||| | ||| | ||| ||||| |||||| Sbjct 141740 CATCGATTGGACGGAGTACTTCATGGCGATGGCCTTCCTCGCAGCCAAGCGCAGCAAGGA 141681 Query 626257 CCCCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGG 626316 || ||| |||||||| || || ||||| ||||| || ||||| ||||| ||| || Sbjct 141680 TCCGTCCACGCAGGTCGGTGCTTGTATCGTGAACGAAGAGAAGCGAGTCGTCGGTATCGG 141621 Query 626317 CTACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGG 626362 ||||||||| || ||| || |||| || |||| ||||| ||| Sbjct 141620 CTACAACGGATTTCCGACCGGTTGCAGCGATGACGAGTTTCCCTGG 141575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084730717717380