Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_033192.1 Length=10072 Score E Sequences producing significant alignments: (Bits) Value seq27 533 9e-148 seq13110 396 2e-106 >seq27 Length=3624 Score = 533 bits (590), Expect = 9e-148 Identities = 490/614 (80%), Gaps = 8/614 (1%) Strand=Plus/Plus Query 9449 CATGAGTTTCATCAAGGATTTGTTCGCCCGCTTCCTGGAGTTGTTCCGCGGTAGTATCTC 9508 |||||| | ||||||||| ||||| ||||| ||| | ||| |||| || |||| |||||| Sbjct 100 CATGAGCTACATCAAGGAGTTGTTTGCCCGTTTCATCGAGCTGTTTCGTGGTAATATCTC 159 Query 9509 GAATGAGATCGTCCGTGAACTAGTCCGCTTGCAGCGGGAGCGTGCAATTACCATCGCTCG 9568 ||| |||||||||||||| || || |||||||| ||||| ||| | | | |||||| || Sbjct 160 GAACGAGATCGTCCGTGAGCTGGTTCGCTTGCAACGGGAACGTACGCTGATCATCGCGCG 219 Query 9569 CACCGTCCTTACGGACGTGTACGTTTACGATGGTAAGGCGTACTTCCGGACTGCCGAAGT 9628 || ||| | || |||||| |||| |||||||| ||||||||||| |||||||| | Sbjct 220 TACTGTCTTAACTGACGTGAACGTGTACGATGGAAAGGCGTACTTTAAAACTGCCGAGAT 279 Query 9629 GAGACGTCATGAGAACATTTACTATCAATATAAGGATGGAAAATGTGCAGTGCTGGAGGA 9688 |||||||||||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct 280 TAGACGTCATGAGAACATTTACTATCAGTATCGTTATGGTAAATGTGCCGTGTTGGAGGA 339 Query 9689 GTCAATCCAGAAGGTTGTTCGTACCTGCTCTGCGTACTCTCGTTTCACGAGTGATTTAAT 9748 || ||||| ||||| |||||| ||| | | || || ||||||||||||| |||||| | Sbjct 340 ATCGATCCAAAAGGTAGTTCGTTCCTTCGCGGCTTATACTCGTTTCACGAGAGATTTAGT 399 Query 9749 CGTCGAGGACGATATTGGAGTTTTAGTTCCGCTTGAGGTTTGCTTTATCAAAACTCAAGC 9808 | || | ||| | ||| |||| || ||||||| |||||||||||| ||||||||||| || Sbjct 400 CATCCAAGACAACATTAGAGTCTTGGTTCCGCATGAGGTTTGCTTCATCAAAACTCAGGC 459 Query 9809 GAACGTTGATCTTGCACTTTCGCCGGCGAATTTGGAAGATCGTGTTGCAGCGATGCGTAA 9868 ||| |||||| | | || ||| ||| | ||||||||||| || |||||||||| Sbjct 460 GAATCGTGATCTCATAGTCTCACCGTCGAGACTTGAAGATCGTGTCGCTACGATGCGTAA 519 Query 9869 ATTCGTTCGCGATTACGACGCTGCTCACTCACCACCGGCCCCAGCTCAGGGT---GTG-G 9924 ||||||| | |||||||| | |||||| || |||| || ||| || ||| | Sbjct 520 GTTCGTTCAGAACTACGACGCAGTGATCTCACCGCCAACCCCTGCCCAGCGTTCAGTGAG 579 Query 9925 TG-AGTCATCCGCCGAGACCCGCATCTCGTAAGATGTGAGTCTCGCCGGA-GAGCCGACG 9982 || |||| || ||||||| | || |||||| | |||||||| || ||| | ||| ||| Sbjct 580 TGTAGTC--CCACCGAGACACACACCTCGTAGGGTGTGAGTCCCGTTGGAGGGGCCAACG 637 Query 9983 GTTGAATATAGGTACCTAGTACCGGGCCGAGACGACGACCGTTGTATACCAGTCTCAATT 10042 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 638 GTTGAATATAGGTACTTAGTACCGGGTCGAGACGACGACCGTTGTATACCAGTCTCAATT 697 Query 10043 CAATATAAATTAAA 10056 |||||||||||||| Sbjct 698 CAATATAAATTAAA 711 >seq13110 Length=5433 Score = 396 bits (438), Expect = 2e-106 Identities = 397/511 (78%), Gaps = 7/511 (1%) Strand=Plus/Plus Query 9449 CATGAGTTTCATCAAGGATTTGTTCGCCCGCTTCCTGGAGTTGTTCCGCGGTAGTATCTC 9508 |||||| | ||||||||| ||||| ||||| ||| | ||| |||| || |||| |||||| Sbjct 4923 CATGAGCTACATCAAGGAGTTGTTTGCCCGTTTCATCGAGCTGTTTCGTGGTAATATCTC 4982 Query 9509 GAATGAGATCGTCCGTGAACTAGTCCGCTTGCAGCGGGAGCGTGCAATTACCATCGCTCG 9568 ||| |||||||||||||| || || |||||||| ||||| ||| | | | |||||| || Sbjct 4983 GAACGAGATCGTCCGTGAGCTGGTTCGCTTGCAACGGGAACGTACGCTGATCATCGCGCG 5042 Query 9569 CACCGTCCTTACGGACGTGTACGTTTACGATGGTAAGGCGTACTTCCGGACTGCCGAAGT 9628 || ||| | || |||||| |||| |||||||| ||||||||||| |||||||| | Sbjct 5043 TACTGTCTTAACTGACGTGAACGTGTACGATGGAAAGGCGTACTTTAAAACTGCCGAGAT 5102 Query 9629 GAGACGTCATGAGAACATTTACTATCAATATAAGGATGGAAAATGTGCAGTGCTGGAGGA 9688 |||||||||||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct 5103 TAGACGTCATGAGAACATTTACTATCAGTATCGTTATGGTAAATGTGCCGTGTTGGAGGA 5162 Query 9689 GTCAATCCAGAAGGTTGTTCGTACCTGCTCTGCGTACTCTCGTTTCACGAGTGATTTAAT 9748 || ||||| ||||| |||||| ||| | | || || ||||||||||||| |||||| | Sbjct 5163 ATCGATCCAAAAGGTAGTTCGTTCCTTCGCGGCTTATACTCGTTTCACGAGAGATTTAGT 5222 Query 9749 CGTCGAGGACGATATTGGAGTTTTAGTTCCGCTTGAGGTTTGCTTTATCAAAACTCAAGC 9808 | || | ||| | ||| |||| || ||||||| |||||||||||| ||||||||||| || Sbjct 5223 CATCCAAGACAACATTAGAGTCTTGGTTCCGCATGAGGTTTGCTTCATCAAAACTCAGGC 5282 Query 9809 GAACGTTGATCTTGCACTTTCGCCGGCGAATTTGGAAGATCGTGTTGCAGCGATGCGTAA 9868 ||| |||||| | | || ||| ||| | ||||||||||| || |||||||||| Sbjct 5283 GAATCGTGATCTCATAGTCTCACCGTCGAGACTTGAAGATCGTGTCGCTACGATGCGTAA 5342 Query 9869 ATTCGTTCGCGATTACGACGCTGCTCACTCACCACCGGCCCCAGCTCAGGGT---GTG-G 9924 ||||||| | |||||||| | |||||| || |||| || ||| || ||| | Sbjct 5343 GTTCGTTCAGAACTACGACGCAGTGATCTCACCGCCAACCCCTGCCCAGCGTTCAGTGAG 5402 Query 9925 TG-AGTCATCCGCCGAGACCCGCATCTCGTA 9954 || |||| || ||||||| | || |||||| Sbjct 5403 TGTAGTC--CCACCGAGACACACACCTCGTA 5431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32109994808528