Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_033731.1 Length=12548 Score E Sequences producing significant alignments: (Bits) Value seq13676 100 2e-17 >seq13676 Length=71703 Score = 100 bits (110), Expect = 2e-17 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 6451 AGTATCTATTTCTAACCACTTAGATTACGAGAAATGGAACAATCACCAAAGGAAGGAATC 6510 |||| |||| | || || |||||||| ||||||||||| |||||||| || || | Sbjct 7895 AGTAACTATGGCAAATCATGTAGATTACAGCAAATGGAACAACCACCAAAGAAAAGAGGC 7954 Query 6511 AAATGATCCTGTATTCAGAGTGATGGGTCAATTTTTGGGAAAGCCTAACTTATTCACTAG 6570 ||| ||||| |||| || ||||| ||||||||||||| | ||||| || ||| Sbjct 7955 AAACAATCCTACTTTCAAGGTCATGGGGCAATTTTTGGGAATGGAAAACTTGTTTTGTAG 8014 Query 6571 GACACATGAGTTTTTCGAGAAATCGTTGATTTATTATGTTGATAGACCTGATTTGATAAG 6630 ||| ||||| || || ||||| || | | |||| |||||||| || ||||| | Sbjct 8015 GACTCATGAATTCTTTGAGAATGCGCTTTTCAATTACCGCGATAGACCAGACTTGATGAC 8074 Query 6631 AGTAGATGAGGAGAA 6645 |||| || | ||| Sbjct 8075 CATAGAAGATGGGAA 8089 Score = 95.1 bits (104), Expect = 1e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 6228 TAGTAATAGGTCTAAGAGCTAAAGAAAGAGAATTAAAATTAACAGGGAGGTTTTTTGCTT 6287 |||||||||| || ||||| ||||| || ||| | |||||| ||||||||| |||||| Sbjct 7717 TAGTAATAGGACTGAGAGCGAAAGAGAGTGAACTGAAATTAGTAGGGAGGTTCTTTGCTC 7776 Query 6288 TAATGTCTTGGGAGTTGAGAGAGTATTTTGTTATAACTGAGT 6329 | ||||| |||| || || ||||||||||| || || |||| Sbjct 7777 TCATGTCGTGGGCTTTAAGGGAGTATTTTGTAATCACAGAGT 7818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40031910626176