Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq987 118 2e-24 >seq987 Length=62723 Score = 118 bits (130), Expect = 2e-24 Identities = 161/218 (74%), Gaps = 9/218 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| | | |||| |||||| | ||||||||| |||| | Sbjct 14369 GTACAAAGGGCAGGGACGTAATCAGCACTAGCTA-ATGACTAGTGCTTACTAGAAATT-C 14312 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 | ||| | | | | ||||| | | ||||| | | |||| |||| | |||| Sbjct 14311 CAGGTTCATGGGGACCG-TTGCAGTCCCCAATCCCGACTA-GATGGGCATTTTAGTGATT 14254 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| ||| |||| || |||| | || |||||| ||||||| Sbjct 14253 TCCCGTTCCTTTCGGAATAGG----AGACACGCTGAAACCCACATTGTAGCACGCGTGCA 14198 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||| |||||||||| || Sbjct 14197 GCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 14160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751989859280