Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq987 89.7 9e-16 >seq987 Length=62723 Score = 89.7 bits (98), Expect = 9e-16 Identities = 178/261 (68%), Gaps = 17/261 (7%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG----------CTCGAATACA 123 ||||| ||||| ||||||||||| | |||||||| || | ||||| Sbjct 13381 TTTACCTTGAACAAATTAGAGTGCTTCAAGCAGGCTCATGAATATATGGCCGAGAATAAT 13440 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTT-CTATTTTGTTGGTTTCTAG---GACC 179 | |||||||||||| ||||| ||| | | | | |||| ||||||| || ||| Sbjct 13441 CTTGCATGGAATAATGGAATATGACCTTGGTCTACAATTTCATTGGTTTGTATACAGACT 13500 Query 180 --GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | ||||||||||| || |||| ||||| | ||||| | |||||||||| Sbjct 13501 CAGAGGTAATGATTAACAGAAGTAGTTGGGGGCATTGGTATTACGGCGCGAGAGGTGAAA 13560 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 ||| | || | ||| |||| ||||||||||| ||| ||||| |||| |||| Sbjct 13561 TTCGTAGACCGTCGTAGGACCAACTGAAGCGAAAGCGTTTGCCATGGATGCTTTCTTTAA 13620 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| ||||||||||||| || Sbjct 13621 TCA-AGAACGAAAGTTAGAGG 13640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915187260416