Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq987 159 6e-37 >seq987 Length=62723 Score = 159 bits (176), Expect = 6e-37 Identities = 112/128 (88%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| ||| ||| ||||||||||||||||||||||||||||||| ||||| | Sbjct 14003 CTAGTTAGCATGTTTGAGTCACGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGA 13944 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTC 261 |||||||||||||||||||||| |||| || | | ||||||||||||||||||||| | Sbjct 13943 ACTAAGAACGGCCATGCACCACTACCCTTAAATTTGAGAAAGAGCTATCAATCTGTCTTA 13884 Query 262 CCTCGATA 269 |||||||| Sbjct 13883 CCTCGATA 13876 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || |||||| ||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 14215 CATTGTAGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 14160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796789255152