Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq987 428 1e-117 >seq987 Length=62723 Score = 428 bits (474), Expect = 1e-117 Identities = 273/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| || |||||| | || | |||| | | ||||||||||||||||| Sbjct 50158 CTCCCACCTATGCTGCACCTCCTATATCGCCTTACAATGCCAAACTAGAGTCAAGCTCAA 50099 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct 50098 CAGGGTCTTCTTTCCCCGCTAGTGCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 50039 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 50038 ATAGTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 49979 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 49978 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGC 49919 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 49918 TTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 49862 Score = 428 bits (474), Expect = 1e-117 Identities = 273/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| || |||||| | || | |||| | | ||||||||||||||||| Sbjct 61649 CTCCCACCTATGCTGCACCTCCTATATCGCCTTACAATGCCAAACTAGAGTCAAGCTCAA 61590 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct 61589 CAGGGTCTTCTTTCCCCGCTAGTGCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 61530 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 61529 ATAGTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 61470 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61469 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGC 61410 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 61409 TTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 61353 Score = 192 bits (212), Expect = 2e-46 Identities = 112/116 (97%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 60238 CGCGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCT 60179 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 60178 TGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 60123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635177238016