Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq872 354 6e-93
seq628 168 5e-37
>seq872
Length=887634
Score = 354 bits (392), Expect = 6e-93
Identities = 1201/1849 (65%), Gaps = 45/1849 (2%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| ||||| || ||||| ||||| | |||| ||||| | || ||||||||||| |||
Sbjct 220943 TCCACCGTAAATTGGATGGCATTTACGGCCGGTTTGGTGCGCAGGTAGTACATGCCCGTC 221002
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197
|| || || ||| || |||||||| ||||| | | || |||| |||||||||
Sbjct 221003 TTTAGTCCCATCTTCCACGCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTCGGCTCG 221062
Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCCAT 65256
||||| || || || || || || ||||||||| |||| || ||||| || |||||
Sbjct 221063 GCCACGTGTATGTTAAATGATTGTGACTGATCGATA-AACGCTCCCCGATCGGCCGCCAT 221121
Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315
| ||| | | || |||| |||||||| || |||||||||||| || | ||
Sbjct 221122 TTTGATGG-ATGTTTTCACCGAGATCTCCCATACCGTCTTGTACAGGTCGCGGATTTCCT 221180
Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATC 65374
|||| || ||||||| || | || || | | ||| | || || |||
Sbjct 221181 TTGGTATTGATTCAATGTTTTGAATCGATCCGTTGTTGGACAAGA-TGTTGTTCTTCAT- 221238
Query 65375 GACTCTGA--CCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432
| | || ||||||||||| | | |||| ||| | || ||| | || | || |
Sbjct 221239 GTCAA-GATCCCACAAACCCATCGCTGTTAGATCTTGCAGCAGATGATGGTTCACCACCT 221297
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
|||||||||| || || ||||| ||| || | ||| |||||| || || ||||| |
Sbjct 221298 GGAACTCGCCCGATAGCACACGTCGGTTGTAAACGTTCGACGTGTACGGCTCGAAGGACT 221357
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552
|| ||||||| | ||||| || || || || || ||||| || || | || | ||||
Sbjct 221358 CATTGTTGCCCAATATTTGTGCCGTCGAAGCTGTCGGCATCGGTGCCAGCAGTAGCGAGT 221417
Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612
| || | |||| | || |||| || | ||| || ||||||||||| | |
Sbjct 221418 TACGAATACCGTGCTTTGCAATCTTCTCCTTCAACTCTGTCCAGTTCCACA---GATC-- 221472
Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672
||||| || | |||||| || | || ||| || | || | || ||||
Sbjct 221473 CGTCGGT-TCTTTGTTCCACATTTCGTACTGTAGGACACCCTTGCTCACTGGACAACCTT 221531
Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTG--GCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730
| | ||||| || ||| | || || | || ||||| | || ||||| |
Sbjct 221532 CATACGTCTCGTATGGACCGTCC--CGTGCAGCCAATTCGCAGCTTGCTTCCAGTGCTCC 221589
Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790
| | || ||||| || || || || |||| || | | ||||| ||||| ||||| ||
Sbjct 221590 ATAGTAGATGGTTTCAAATATTTGTTGATTCAGCTTTTGGGCCTCTTCGCTTTCGTATGG 221649
Query 65791 CATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGAT 65849
||| | ||| | | || | ||||||| || || || || ||||||||||| | |
Sbjct 221650 -ATAGCGCATTAAAATGAACGCATCGGCCATGCCCTGCACACCGATACCGATGGGCCTGT 221708
Query 65850 GACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGAT 65909
| |||| |||||||| ||||||| || || || ||||| || || ||||| || |
Sbjct 221709 GGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGATAGTAGTTTATGTCGATGATTTTGT 221768
Query 65910 TCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAG 65969
||| ||||||||| || | | ||| | || | | ||||||| |
Sbjct 221769 TCAGATTGCGTGTTACTATCTTGGCGACATCCTTCAGCTTTACGAAATC----------G 221818
Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029
||| | | |||| || ||| || || || | || || || ||||| |
Sbjct 221819 TACGTCC-----TATCGGATTTTACGAACATGTTCAGTGCGATCGAGGCCAGATTGCAAA 221873
Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089
| || || || || | | ||||| ||||| || ||||||| ||| || |
Sbjct 221874 CCGCAATTTCATCCTTCGACGAGTACTCCACAATCTCAGTGCACAAGTTAGAACACTTAA 221933
Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149
||||||| | ||||| || || || ||||| ||||||||||||||||||| ||| ||||
Sbjct 221934 TGGTGCCAATGTTCTGCTGGTTGCTTTTGCGGTTGCATGCATCCTTGTACAGCATATACG 221993
Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCG 66209
| ||| || || || || || |||||||| ||| ||| | | | |||||||||||
Sbjct 221994 GTACGCCCGTTTCCACCTGCGATTCAATGATCGCGAACCACAAATCCTGTGCCTTCACCT 222053
Query 66210 TACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCC 66269
|| | | ||| | ||||| ||| || ||||| ||||||||
Sbjct 222054 GGCGAATAAAACGACCCTCTTTCTCGTAGCCAGTGTACAGTGCCTCGAACTTTTCACCCC 222113
Query 66270 ATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTT 66329
| || |||| || ||||| | ||| || ||||| || ||| | | | |
Sbjct 222114 AGCTATCAGACAAACCGGGACAATCGTGAGGGCACATTAGACTCCACATTTCGTTCGCCT 222173
Query 66330 CTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTT 66389
| || || ||| || ||||| || ||||| | |||||| || | |||||||| ||
Sbjct 222174 CCACCCGCTCCATGAACAGATCCGGAATCCACAAGGCGTAAAACATGTCGCGTGCACGCA 222233
Query 66390 GCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATG 66449
|||||| ||||| ||||| || || || ||||| || | || | ||||| |
Sbjct 222234 CCTCCTCTTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAACACATCACCGTGCCACG 222293
Query 66450 GTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAG 66509
|||| ||||||||||| || | ||| || ||| |||||| || || ||||| || |
Sbjct 222294 GTTCGAGGTAGATGGCAAAAGCTCCCGGGCGCTTGTTGCCACCCTGATCCACGTATCGGG 222353
Query 66510 CGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGT 66569
| ||||||| | || |||| ||| || || | |||||| || | ||||| |||||
Sbjct 222354 CCGTATTGTTGTACACGCGCAGCATTGGCACCAACCCGTTTGAAATTCCATTCGTGCCCG 222413
Query 66570 CGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCT 66629
|||| | ||| || || ||| ||| || ||||| ||||| || || || | |
Sbjct 222414 AGATGTACGTACCTTTCGCGCGAATACAGTGCACGTTCAGCCCAATTCCGCCAGCAGATT 222473
Query 66630 TCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGA 66689
| || || ||||| | || || | | || || |||||| ||| || |
Sbjct 222474 TTGAAATCAGTGCACACTGCTTCAGCGTATCGTAGATACCTTCAATGCTGTCGTCCGACA 222533
Query 66690 TGGTCAGGAGGTAGCATGA--ACTAAGTTGGG--GTTTGGGTGTGGCGGCCGAGAAGAGG 66745
|||| || | | | || || || || | || ||| | || || |||| || | |
Sbjct 222534 TGGTGAGCAAGAAACAGGACGAC-AACTGCGGACGTT---GCGTAGCCGCCGCAAACATG 222589
Query 66746 GTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCA 66805
|| |||| || || |||||||| | || | |||||| |||||||| | |||
Sbjct 222590 GTCGGTGAGGCATGGGTAAAGTAGCGCTCCGAAAGCAGATTGTAAGTCTCGATTGCTGCA 222649
Query 66806 TCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865
|| |||| ||| |||||||| |||| ||| ||||||| | | || || || ||
Sbjct 222650 TCGATGTCTTCACCATGAATGCCGATCGCAACGCGCATCAACATATGCTGCGGTCGCTCA 222709
Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914
|| | | ||||||| | || |||||||| || || | || ||||
Sbjct 222710 ACGATCTTGCCCTTGATCTTCAACAAGTAGGACCGCTCTAAAGTTTTGA 222758
>seq628
Length=1452984
Score = 168 bits (186), Expect = 5e-37
Identities = 200/268 (75%), Gaps = 6/268 (2%)
Strand=Plus/Minus
Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165
||||||||||||| |||||||| ||||| ||||| ||| ||||||| |||||||| ||||
Sbjct 708794 AGGCGGAAGCTTCGTTCTGGACCGTGGAAGAGGTGGATCTGTCCAAGGACATGAAAGACT 708735
Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222
|||| |||| | |||||| ||| || || || || || | || |||||||
Sbjct 708734 GGGATTCGTTGAAACCGAGCG---AACGCCACTTTATCTCGCACGTACTTGCCTTCTTTG 708678
Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282
|||| || || || ||||| || || || | | ||||||||| |||||||| || |
Sbjct 708677 CCGCATCCGATGGCATCGTGAACGAAAACCTGGTCGAACGTTTCAGCCAGGAGGTACAGG 708618
Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342
| |||| || || ||||| |||||||| || || || ||||| ||||| ||| ||||
Sbjct 708617 TAACGGAAGCTCGCTGTTTTTACGGCTTTCAAATAGCGATGGAAAATGTGCACAGCGAGA 708558
Query 61343 TGTACAGTGTTCTCATCGATACGTACAT 61370
||||| | || ||||| ||||||||
Sbjct 708557 TGTACTCACTGCTAATCGACACGTACAT 708530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397561255258880
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