Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1260 96.9 1e-14 >seq1260 Length=819195 Score = 96.9 bits (106), Expect = 1e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 626197 CATCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGA 626256 |||||| ||| ||| ||||| ||| | |||| ||||| | || ||||| ||| || Sbjct 475131 CATCGACTGGACGGAGTACTTCATGGCGATGGCTTTTCTCGCAGCGAAGCGCAGCAAAGA 475072 Query 626257 CCCCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGG 626316 || || ||||| ||||| |||||||| |||||||||||||| || || ||| || Sbjct 475071 TCCATCTACACAGGTTGGGGCTTGCATCGTGAACGAGGACAAGCGTGTTGTAGGTATCGG 475012 Query 626317 CTACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGG 626362 |||||||| || || || |||| ||| |||| ||||| ||| Sbjct 475011 GTACAACGGGTTTCCCACCGGTTGCAGTGATGACGAGTTTCCATGG 474966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084701111814816