Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_028484.1
Length=11343
Score E
Sequences producing significant alignments: (Bits) Value
seq778 154 1e-33
>seq778
Length=78982
Score = 154 bits (170), Expect = 1e-33
Identities = 285/411 (69%), Gaps = 8/411 (2%)
Strand=Plus/Minus
Query 6560 ATGATTTGGTAATTGGATTAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCT 6619
|||| |||| |||||||| | |||||| ||||| || | || ||||| || ||||
Sbjct 32522 ATGAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCT 32463
Query 6620 TTGCACTCATGAGTTGGCGCCTT-CGCGAGTACTTTGTATTTACTGAATATTTAATCAAG 6678
|||| || ||||||||| || || || || ||||| || | ||||| || || || |||
Sbjct 32462 TTGCCCTGATGAGTTGG-GCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAG 32404
Query 6679 AAGAATGTGATCCCACTATTCAAAGGATTGACCATGGCGGATGATCAAACGACTTTGATC 6738
||| | | |||| ||| || ||| || || ||||| |||||| | | || || ||
Sbjct 32403 AAGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTC 32344
Query 6739 AAGAAGATGATTCAGAACA-CAAGTGGACAAGGAGGAAATGATTACAAGCATATAACGTT 6797
|| || ||||| || | || | ||| ||| | | ||||| | | | || |
Sbjct 32343 AATAAAATGATGCA-AGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAAT 32285
Query 6798 TGCGAATCACATCGATTACGAAAAGTGGAACAATTTCCAAAGATATGAATCAACAGCTCC 6857
||| || ||| | || || |||||||||||||||| || ||| ||| ||| | |||
Sbjct 32284 TGCTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCC 32225
Query 6858 --TGTTTTCCGGGTGATTGGACAATTTTTTGGTCTACCGAACTTATTTGTGCGAACGCAT 6915
| |||||| || || ||| |||| ||||| | || || || ||||| |||| |||
Sbjct 32224 GGTATTTTCC--GTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCAT 32167
Query 6916 GAATTCTTTGAAAAAGCACTGGTGTACTATCGAGACAGACCTGACCTGATG 6966
|| ||||| ||||||||| | || || || ||||||||| | |||
Sbjct 32166 GAGTTCTTCTCAAAAGCACTATTTTATTACAAGGATAGACCTGACTTAATG 32116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36181833383616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |