Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_033034.1
Length=13000
Score E
Sequences producing significant alignments: (Bits) Value
seq778 82.4 6e-12
>seq778
Length=78982
Score = 82.4 bits (90), Expect = 6e-12
Identities = 256/389 (66%), Gaps = 8/389 (2%)
Strand=Plus/Minus
Query 7996 ATGATTTGGTCATCGGACTGAAAGAAAAGGAGCGGGAATTGAAAACAGCAGGACGTTTCT 8055
|||| ||||||| ||| ||| | ||||||| ||||||||||| | ||| || ||||
Sbjct 32522 ATGAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCT 32463
Query 8056 TTTCATTAATGTCTTGGAAGCTGAGAGAATATTTTGTAATAACTGAATATCTCATAAA-A 8114
|| | | ||| |||| | |||| || || || |||||||| || | ||||| |
Sbjct 32462 TTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGA 32403
Query 8115 ACCTTTTATGTCCCTCTTTTTTATGGATTAACAATGGCTGATGACTTAGTTACTGTTATG 8174
| | || ||||| | | || ||||| ||||||||||| | || || |
Sbjct 32402 AGCACTT-CGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTC 32344
Query 8175 AGAAAAATGCTCGAAACATCATCTGGACAAGGATTGGATAATTATGATGTGAT--CTATT 8232
| |||||| | || |||| ||||| ||| | ||||||| | | | | |||
Sbjct 32343 AATAAAATGATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATT 32284
Query 8233 TGGCCAATCACATCGATTATGAGAAATGGAATAACCACCAACGACAAGCCTCGACTGGTC 8292
|| || ||| | || ||||| || ||||| || | || || || | | || ||
Sbjct 32283 --GCTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATC 32226
Query 8293 CTGTATTTAAGGTGATGGGACAATTCTTGGGTTACCCTAATTTAATTTACAGAACACACG 8352
| |||||| || |||||| ||||||| || | || ||||| || ||||| || |
Sbjct 32225 CGGTATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATG 32166
Query 8353 AATTTTTTGAGAAAAGC-CTGATTTATTA 8380
| || || |||||| || |||||||
Sbjct 32165 -AGTTCTTCTCAAAAGCACTATTTTATTA 32138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41484150348032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |