Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq41190 91.5 2e-13 >seq41190 Length=4563 Score = 91.5 bits (100), Expect = 2e-13 Identities = 227/342 (66%), Gaps = 2/342 (1%) Strand=Plus/Plus Query 162496 GAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAA 162555 || || || ||||| |||| |||||| | ||||| || || || || | ||| ||| Sbjct 858 GAAACGCCGCAGAACGAAAAAACTCCATTCTATCCGCGCTCGCCGTACGCTTGTGCAAAA 917 Query 162556 CTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGC 162615 | || || | |||||| | | || ||| | || || |||| ||||| | | Sbjct 918 ATGTACGGCTACTGGATAGTGATCAATTACCGCGAGGCGTACAACATGTTTGCCTGCAAC 977 Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 |||||||| ||||| ||||| | || | || |||| || || |||||||| ||| Sbjct 978 GGTATTCTCTTCAACCACGAGTCGCCCCGGCGGGGTGAGAACTTTGTGACACGCAAAATC 1037 Query 162676 GTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAA-AGTGATCTACAACTTGGAAACCT 162734 || | || | ||| | || | || |||| | | || || || || Sbjct 1038 ACTCGCTCGGTGGCGAAGATTTCGCTCGGCCAGCAGGAGTGCG-TCGAGCTCGGTAATCT 1096 Query 162735 CAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCT 162794 | || | ||||||||||| ||||| ||||||||||| || || |||||||||||| | Sbjct 1097 CGATTCGAAGCGTGACTGGGGCCACGCAAAAGACTACGTCGAAGCAATGTGGTTGATGAT 1156 Query 162795 TCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGA 162836 ||||| || |||| || |||| || ||||| || || || Sbjct 1157 GCAGCAGAAGCAGCCGGAAGATTTCGTCATCGCGACGGGCGA 1198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691096832163000