Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6650 140 5e-31 seq1052 96.9 6e-18 >seq6650 Length=3042 Score = 140 bits (154), Expect = 5e-31 Identities = 109/129 (84%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCG-TTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 ||| ||||| ||| ||| || ||||||||||||||||||||||||||||| ||||| Sbjct 585 CTAGTTAGCTTGTTTGAGTCGCGGTTCGTTATCGGAATTAACCAGACAAATCATTCCACG 526 Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCT 260 ||||||||||||||||||||||| |||| || | |||||||||||| |||||||| | Sbjct 525 AACTAAGAACGGCCATGCACCACTACCCTTAAGTTTGAGAAAGAGCTATTAATCTGTCTT 466 Query 261 CCCTCGATA 269 |||||||| Sbjct 465 ACCTCGATA 457 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || |||||| ||||||| |||||||||||||||||||||||| |||||||||| || Sbjct 766 CATTGTAGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCGC 711 >seq1052 Length=130773 Score = 96.9 bits (106), Expect = 6e-18 Identities = 77/94 (82%), Gaps = 8/94 (9%) Strand=Plus/Plus Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||||||||||||| ||||| ||||||||||||||||||||||| |||| || Sbjct 79969 AATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGCACCACTACCCTTA---- 80024 Query 236 CAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 |||||||| |||||||| | |||||||| Sbjct 80025 ----TTAGAGCTATTAATCTGTCTTACCTCGATA 80054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796409495790