Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq9789 277 3e-72 seq3064 271 1e-70 seq3123 168 1e-39 seq37935 84.2 4e-14 >seq9789 Length=2524 Score = 277 bits (306), Expect = 3e-72 Identities = 214/251 (85%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 584 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 642 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||| | |||||||||||| ||||| Sbjct 643 GAAAGGGTGAACAATCCTACGCTTGGGGAATTTTGCTACACAATGATAGGAAGACCCGAC 702 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 703 ATCGAAGGATCAAAAAGTCACGTCGCTATGAACGCTTGGCGACCACAAGCCAGTTATCCC 762 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG--AGGGACTAAAGGATCGATAG 269 |||||||||||||||| ||||||| | || ||| ||| | | ||||||||| || Sbjct 763 TGTGGTAACTTTTCTGACACCTCTTG-CTAAAAACTCGTTATAACCAAAAGGATCGTAAG 821 Query 270 GCCACACTTTC 280 |||| ||||| Sbjct 822 GCCAAGCTTTC 832 >seq3064 Length=18692 Score = 271 bits (300), Expect = 1e-70 Identities = 213/251 (85%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 18448 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 18390 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 18389 GAAAGGGTGAACAATCCTACGCTTGGGGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 18330 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||||||| ||||||||||||||||||||| | |||||||||||||| Sbjct 18329 ATCGAAGGATCAAAAAGTCACGTCGCTATGAACGCTTGGCGAAAAAAAGCCAGTTATCCC 18270 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG--AGGGACTAAAGGATCGATAG 269 |||||||||||||||| ||||||| | || ||| ||| | | ||||||||| || Sbjct 18269 TGTGGTAACTTTTCTGACACCTCTTG-CTAAAAACTCGTTATAACCAAAAGGATCGTAAG 18211 Query 270 GCCACACTTTC 280 |||| ||||| Sbjct 18210 GCCAAGCTTTC 18200 Score = 95.1 bits (104), Expect = 2e-17 Identities = 86/106 (81%), Gaps = 3/106 (3%) Strand=Plus/Minus Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236 ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct 4179 CTATGAACGCTTGGCGACCACAAGCCAGTTATCCCTGTGGTAACTTTTTTGACACCTCTT 4120 Query 237 GCCTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTC 280 | || ||| ||| | | ||||||||| |||||| ||||| Sbjct 4119 G-CTAAAAACTCGTTATAACCAAAAGGATCGTAAGGCCAAGCTTTC 4075 >seq3123 Length=17580 Score = 168 bits (186), Expect = 1e-39 Identities = 130/152 (86%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 10352 GGGATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGTCACGTCGCTATGAACGCTTGG 10411 Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG- 249 | |||||||||||||||||||||||||||||||||| ||||||| | || ||| ||| Sbjct 10412 CGACCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG-CTAAAAACTCGT 10470 Query 250 -AGGGACTAAAGGATCGATAGGCCACACTTTC 280 | | ||||||||| |||||| ||||| Sbjct 10471 TATAACCAAAAGGATCGTAAGGCCAAGCTTTC 10502 Score = 75.2 bits (82), Expect = 2e-11 Identities = 49/54 (91%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT 217 ||||| ||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 2893 AAAAGTCACGTCGCTATGAACGCTTGGCGACCACAAGCCAGTTATCCCTGTAGT 2946 >seq37935 Length=233 Score = 84.2 bits (92), Expect = 4e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 38 TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 ||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct 174 TAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGCTCCC 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853967759040