Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_028484.1 Length=11343 Score E Sequences producing significant alignments: (Bits) Value seq1440 120 2e-23 seq9517 118 8e-23 seq8251 118 8e-23 seq1814 118 8e-23 seq2296 86.0 5e-13 >seq1440 Length=90230 Score = 120 bits (132), Expect = 2e-23 Identities = 253/373 (68%), Gaps = 7/373 (2%) Strand=Plus/Plus Query 6553 CAGGAAGATGATTTGGTAATTGGATTAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGA 6612 |||||| ||| || || || || | | |||||||| |||| | || |||||| Sbjct 51970 CAGGAA--TGAATTAGTGATCGGTCTGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGA 52024 Query 6613 CGATTCTTTGCACTCATGAGTTGGCGCCTTCGCGAGTACTTTGTATTTACTGAATATTTA 6672 |||| ||||| |||||||||||| ||||| || |||||||| | || || ||||| Sbjct 52025 AGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTG 52084 Query 6673 ATCAAGAAGAATGTGATCCCACTATTCAAAGGATTGACCATGGCGGATGATCAAACGACT 6732 || |||||| || | | || || | | |||||| || ||||| || || | | || Sbjct 52085 ATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACC 52144 Query 6733 TTGATCAAGAAGATGATTCAGAACACAAGTGGACA-AGGAGGAAATGATTACAAGCATAT 6791 | |||| |||||||| || || |||||| | | | | ||| | | | Sbjct 52145 GTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAG-TTATGATGAGGT 52203 Query 6792 AACGTTTGCGAATCACATCGATTACGAAAAGTGGAACAATTTCCAAAGATATGAATCAAC 6851 || | || ||||| | ||||| || ||||||||||||| |||||| ||| || Sbjct 52204 GACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAA 52263 Query 6852 AGCTCCTGTTTTCCGGGTGATTGGACAATTTTTTGGTCTACCGAACTTATTTGTGCGAAC 6911 | ||| || ||| || || || | ||||||||| |||| || || ||| | |||| Sbjct 52264 TGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAAC 52323 Query 6912 GCATGAATTCTTT 6924 |||||||||||| Sbjct 52324 ACATGAATTCTTT 52336 >seq9517 Length=2557 Score = 118 bits (130), Expect = 8e-23 Identities = 274/408 (67%), Gaps = 9/408 (2%) Strand=Plus/Plus Query 6520 GCATTCTTGAAGGAGATCGATGAACAAGGATTG--CAGGAAGATGATTTGGTAATTGGAT 6577 ||||| ||| || ||| | || || ||| | |||||| ||| || || || || Sbjct 516 GCATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAA--TGAGTTAGTGATCGGTC 573 Query 6578 TAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCTTTGCACTCATGAGTTGGC 6637 | | |||||||| |||| | || |||||| |||| ||||| |||||||||||| Sbjct 574 TGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGT 630 Query 6638 GCCTTCGCGAGTACTTTGTATTTACTGAATATTTAATCAAGAAGAATGTGATCCCACTAT 6697 ||||| || |||||||| | || || ||||| || |||||| || | | || || | Sbjct 631 CTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCT 690 Query 6698 TCAAAGGATTGACCATGGCGGATGATCAAACGACTTTGATCAAGAAGATGATTCAGAACA 6757 | |||||| || ||||| || || | | || | |||| |||||||| || Sbjct 691 GTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTT 750 Query 6758 CAAGTGGACA-AGGAGGAAATGATTACAAGCATATAACGTTTGCGAATCACATCGATTAC 6816 || |||||| | | | | ||| | | || | || ||||| | ||||| Sbjct 751 CATCTGGACAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTAT 809 Query 6817 GAAAAGTGGAACAATTTCCAAAGATATGAATCAACAGCTCCTGTTTTCCGGGTGATTGGA 6876 || ||||||||||||| |||||| ||| || | ||| || ||| || || || Sbjct 810 GAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGT 869 Query 6877 CAATTTTTTGGTCTACCGAACTTATTTGTGCGAACGCATGAATTCTTT 6924 | ||||||||| |||| || || ||| | |||| |||||||||||| Sbjct 870 CGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 917 >seq8251 Length=2688 Score = 118 bits (130), Expect = 8e-23 Identities = 274/408 (67%), Gaps = 9/408 (2%) Strand=Plus/Plus Query 6520 GCATTCTTGAAGGAGATCGATGAACAAGGATTG--CAGGAAGATGATTTGGTAATTGGAT 6577 ||||| ||| || ||| | || || ||| | |||||| ||| || || || || Sbjct 191 GCATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAA--TGAGTTAGTGATCGGTC 248 Query 6578 TAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCTTTGCACTCATGAGTTGGC 6637 | | |||||||| |||| | || |||||| |||| ||||| |||||||||||| Sbjct 249 TGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGT 305 Query 6638 GCCTTCGCGAGTACTTTGTATTTACTGAATATTTAATCAAGAAGAATGTGATCCCACTAT 6697 ||||| || |||||||| | || || ||||| || |||||| || | | || || | Sbjct 306 CTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCT 365 Query 6698 TCAAAGGATTGACCATGGCGGATGATCAAACGACTTTGATCAAGAAGATGATTCAGAACA 6757 | |||||| || ||||| || || | | || | |||| |||||||| || Sbjct 366 GTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTT 425 Query 6758 CAAGTGGACA-AGGAGGAAATGATTACAAGCATATAACGTTTGCGAATCACATCGATTAC 6816 || |||||| | | | | ||| | | || | || ||||| | ||||| Sbjct 426 CATCTGGACAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTAT 484 Query 6817 GAAAAGTGGAACAATTTCCAAAGATATGAATCAACAGCTCCTGTTTTCCGGGTGATTGGA 6876 || ||||||||||||| |||||| ||| || | ||| || ||| || || || Sbjct 485 GAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGT 544 Query 6877 CAATTTTTTGGTCTACCGAACTTATTTGTGCGAACGCATGAATTCTTT 6924 | ||||||||| |||| || || ||| | |||| |||||||||||| Sbjct 545 CGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 592 >seq1814 Length=63972 Score = 118 bits (130), Expect = 8e-23 Identities = 274/408 (67%), Gaps = 9/408 (2%) Strand=Plus/Plus Query 6520 GCATTCTTGAAGGAGATCGATGAACAAGGATTG--CAGGAAGATGATTTGGTAATTGGAT 6577 ||||| ||| || ||| | || || ||| | |||||| ||| || || || || Sbjct 1597 GCATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAA--TGAGTTAGTGATCGGTC 1654 Query 6578 TAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCTTTGCACTCATGAGTTGGC 6637 | | |||||||| |||| | || |||||| |||| ||||| |||||||||||| Sbjct 1655 TGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGT 1711 Query 6638 GCCTTCGCGAGTACTTTGTATTTACTGAATATTTAATCAAGAAGAATGTGATCCCACTAT 6697 ||||| || |||||||| | || || ||||| || |||||| || | | || || | Sbjct 1712 CTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCT 1771 Query 6698 TCAAAGGATTGACCATGGCGGATGATCAAACGACTTTGATCAAGAAGATGATTCAGAACA 6757 | |||||| || ||||| || || | | || | |||| |||||||| || Sbjct 1772 GTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTT 1831 Query 6758 CAAGTGGACA-AGGAGGAAATGATTACAAGCATATAACGTTTGCGAATCACATCGATTAC 6816 || |||||| | | | | ||| | | || | || ||||| | ||||| Sbjct 1832 CATCTGGACAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTAT 1890 Query 6817 GAAAAGTGGAACAATTTCCAAAGATATGAATCAACAGCTCCTGTTTTCCGGGTGATTGGA 6876 || ||||||||||||| |||||| ||| || | ||| || ||| || || || Sbjct 1891 GAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGT 1950 Query 6877 CAATTTTTTGGTCTACCGAACTTATTTGTGCGAACGCATGAATTCTTT 6924 | ||||||||| |||| || || ||| | |||| |||||||||||| Sbjct 1951 CGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 1998 >seq2296 Length=40579 Score = 86.0 bits (94), Expect = 5e-13 Identities = 140/200 (70%), Gaps = 5/200 (3%) Strand=Plus/Plus Query 6553 CAGGAAGATGATTTGGTAATTGGATTAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGA 6612 |||||| ||| || || || || | | |||||||| |||| | || |||||| Sbjct 1695 CAGGAA--TGAGTTAGTGATCGGTCTGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGA 1749 Query 6613 CGATTCTTTGCACTCATGAGTTGGCGCCTTCGCGAGTACTTTGTATTTACTGAATATTTA 6672 |||| ||||| |||||||||||| ||||| || |||||||| | || || ||||| Sbjct 1750 AGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTG 1809 Query 6673 ATCAAGAAGAATGTGATCCCACTATTCAAAGGATTGACCATGGCGGATGATCAAACGACT 6732 || |||||| || | | || || | | |||||| || ||||| || || | | || Sbjct 1810 ATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACC 1869 Query 6733 TTGATCAAGAAGATGATTCA 6752 | |||| |||||||| || Sbjct 1870 GTAGTCAACAAGATGATGCA 1889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36161807239320