Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_028484.1
Length=11343
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 120 2e-23
seq9517 118 8e-23
seq8251 118 8e-23
seq1814 118 8e-23
seq2296 86.0 5e-13
>seq1440
Length=90230
Score = 120 bits (132), Expect = 2e-23
Identities = 253/373 (68%), Gaps = 7/373 (2%)
Strand=Plus/Plus
Query 6553 CAGGAAGATGATTTGGTAATTGGATTAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGA 6612
|||||| ||| || || || || | | |||||||| |||| | || ||||||
Sbjct 51970 CAGGAA--TGAATTAGTGATCGGTCTGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGA 52024
Query 6613 CGATTCTTTGCACTCATGAGTTGGCGCCTTCGCGAGTACTTTGTATTTACTGAATATTTA 6672
|||| ||||| |||||||||||| ||||| || |||||||| | || || |||||
Sbjct 52025 AGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTG 52084
Query 6673 ATCAAGAAGAATGTGATCCCACTATTCAAAGGATTGACCATGGCGGATGATCAAACGACT 6732
|| |||||| || | | || || | | |||||| || ||||| || || | | ||
Sbjct 52085 ATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACC 52144
Query 6733 TTGATCAAGAAGATGATTCAGAACACAAGTGGACA-AGGAGGAAATGATTACAAGCATAT 6791
| |||| |||||||| || || |||||| | | | | ||| | | |
Sbjct 52145 GTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAG-TTATGATGAGGT 52203
Query 6792 AACGTTTGCGAATCACATCGATTACGAAAAGTGGAACAATTTCCAAAGATATGAATCAAC 6851
|| | || ||||| | ||||| || ||||||||||||| |||||| ||| ||
Sbjct 52204 GACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAA 52263
Query 6852 AGCTCCTGTTTTCCGGGTGATTGGACAATTTTTTGGTCTACCGAACTTATTTGTGCGAAC 6911
| ||| || ||| || || || | ||||||||| |||| || || ||| | ||||
Sbjct 52264 TGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAAC 52323
Query 6912 GCATGAATTCTTT 6924
||||||||||||
Sbjct 52324 ACATGAATTCTTT 52336
>seq9517
Length=2557
Score = 118 bits (130), Expect = 8e-23
Identities = 274/408 (67%), Gaps = 9/408 (2%)
Strand=Plus/Plus
Query 6520 GCATTCTTGAAGGAGATCGATGAACAAGGATTG--CAGGAAGATGATTTGGTAATTGGAT 6577
||||| ||| || ||| | || || ||| | |||||| ||| || || || ||
Sbjct 516 GCATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAA--TGAGTTAGTGATCGGTC 573
Query 6578 TAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCTTTGCACTCATGAGTTGGC 6637
| | |||||||| |||| | || |||||| |||| ||||| ||||||||||||
Sbjct 574 TGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGT 630
Query 6638 GCCTTCGCGAGTACTTTGTATTTACTGAATATTTAATCAAGAAGAATGTGATCCCACTAT 6697
||||| || |||||||| | || || ||||| || |||||| || | | || || |
Sbjct 631 CTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCT 690
Query 6698 TCAAAGGATTGACCATGGCGGATGATCAAACGACTTTGATCAAGAAGATGATTCAGAACA 6757
| |||||| || ||||| || || | | || | |||| |||||||| ||
Sbjct 691 GTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTT 750
Query 6758 CAAGTGGACA-AGGAGGAAATGATTACAAGCATATAACGTTTGCGAATCACATCGATTAC 6816
|| |||||| | | | | ||| | | || | || ||||| | |||||
Sbjct 751 CATCTGGACAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTAT 809
Query 6817 GAAAAGTGGAACAATTTCCAAAGATATGAATCAACAGCTCCTGTTTTCCGGGTGATTGGA 6876
|| ||||||||||||| |||||| ||| || | ||| || ||| || || ||
Sbjct 810 GAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGT 869
Query 6877 CAATTTTTTGGTCTACCGAACTTATTTGTGCGAACGCATGAATTCTTT 6924
| ||||||||| |||| || || ||| | |||| ||||||||||||
Sbjct 870 CGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 917
>seq8251
Length=2688
Score = 118 bits (130), Expect = 8e-23
Identities = 274/408 (67%), Gaps = 9/408 (2%)
Strand=Plus/Plus
Query 6520 GCATTCTTGAAGGAGATCGATGAACAAGGATTG--CAGGAAGATGATTTGGTAATTGGAT 6577
||||| ||| || ||| | || || ||| | |||||| ||| || || || ||
Sbjct 191 GCATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAA--TGAGTTAGTGATCGGTC 248
Query 6578 TAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCTTTGCACTCATGAGTTGGC 6637
| | |||||||| |||| | || |||||| |||| ||||| ||||||||||||
Sbjct 249 TGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGT 305
Query 6638 GCCTTCGCGAGTACTTTGTATTTACTGAATATTTAATCAAGAAGAATGTGATCCCACTAT 6697
||||| || |||||||| | || || ||||| || |||||| || | | || || |
Sbjct 306 CTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCT 365
Query 6698 TCAAAGGATTGACCATGGCGGATGATCAAACGACTTTGATCAAGAAGATGATTCAGAACA 6757
| |||||| || ||||| || || | | || | |||| |||||||| ||
Sbjct 366 GTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTT 425
Query 6758 CAAGTGGACA-AGGAGGAAATGATTACAAGCATATAACGTTTGCGAATCACATCGATTAC 6816
|| |||||| | | | | ||| | | || | || ||||| | |||||
Sbjct 426 CATCTGGACAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTAT 484
Query 6817 GAAAAGTGGAACAATTTCCAAAGATATGAATCAACAGCTCCTGTTTTCCGGGTGATTGGA 6876
|| ||||||||||||| |||||| ||| || | ||| || ||| || || ||
Sbjct 485 GAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGT 544
Query 6877 CAATTTTTTGGTCTACCGAACTTATTTGTGCGAACGCATGAATTCTTT 6924
| ||||||||| |||| || || ||| | |||| ||||||||||||
Sbjct 545 CGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 592
>seq1814
Length=63972
Score = 118 bits (130), Expect = 8e-23
Identities = 274/408 (67%), Gaps = 9/408 (2%)
Strand=Plus/Plus
Query 6520 GCATTCTTGAAGGAGATCGATGAACAAGGATTG--CAGGAAGATGATTTGGTAATTGGAT 6577
||||| ||| || ||| | || || ||| | |||||| ||| || || || ||
Sbjct 1597 GCATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAA--TGAGTTAGTGATCGGTC 1654
Query 6578 TAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCTTTGCACTCATGAGTTGGC 6637
| | |||||||| |||| | || |||||| |||| ||||| ||||||||||||
Sbjct 1655 TGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGT 1711
Query 6638 GCCTTCGCGAGTACTTTGTATTTACTGAATATTTAATCAAGAAGAATGTGATCCCACTAT 6697
||||| || |||||||| | || || ||||| || |||||| || | | || || |
Sbjct 1712 CTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCT 1771
Query 6698 TCAAAGGATTGACCATGGCGGATGATCAAACGACTTTGATCAAGAAGATGATTCAGAACA 6757
| |||||| || ||||| || || | | || | |||| |||||||| ||
Sbjct 1772 GTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTT 1831
Query 6758 CAAGTGGACA-AGGAGGAAATGATTACAAGCATATAACGTTTGCGAATCACATCGATTAC 6816
|| |||||| | | | | ||| | | || | || ||||| | |||||
Sbjct 1832 CATCTGGACAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTAT 1890
Query 6817 GAAAAGTGGAACAATTTCCAAAGATATGAATCAACAGCTCCTGTTTTCCGGGTGATTGGA 6876
|| ||||||||||||| |||||| ||| || | ||| || ||| || || ||
Sbjct 1891 GAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGT 1950
Query 6877 CAATTTTTTGGTCTACCGAACTTATTTGTGCGAACGCATGAATTCTTT 6924
| ||||||||| |||| || || ||| | |||| ||||||||||||
Sbjct 1951 CGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 1998
>seq2296
Length=40579
Score = 86.0 bits (94), Expect = 5e-13
Identities = 140/200 (70%), Gaps = 5/200 (3%)
Strand=Plus/Plus
Query 6553 CAGGAAGATGATTTGGTAATTGGATTAAAGGCAAAAGAGAGAGAGATTAAGTGGAAAGGA 6612
|||||| ||| || || || || | | |||||||| |||| | || ||||||
Sbjct 1695 CAGGAA--TGAGTTAGTGATCGGTCTGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGA 1749
Query 6613 CGATTCTTTGCACTCATGAGTTGGCGCCTTCGCGAGTACTTTGTATTTACTGAATATTTA 6672
|||| ||||| |||||||||||| ||||| || |||||||| | || || |||||
Sbjct 1750 AGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTG 1809
Query 6673 ATCAAGAAGAATGTGATCCCACTATTCAAAGGATTGACCATGGCGGATGATCAAACGACT 6732
|| |||||| || | | || || | | |||||| || ||||| || || | | ||
Sbjct 1810 ATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACC 1869
Query 6733 TTGATCAAGAAGATGATTCA 6752
| |||| |||||||| ||
Sbjct 1870 GTAGTCAACAAGATGATGCA 1889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36161807239320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |