Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_032907.1 Length=13109 Score E Sequences producing significant alignments: (Bits) Value seq1440 149 5e-32 seq9517 141 8e-30 seq8251 141 8e-30 seq1814 141 8e-30 >seq1440 Length=90230 Score = 149 bits (164), Expect = 5e-32 Identities = 252/360 (70%), Gaps = 9/360 (3%) Strand=Plus/Plus Query 8188 GTAATCGGGCTGAGAGGAAAGGAA-AGA-GAAATCAAAAGGATAGGTCGATTCTTCGCTC 8245 || ||||| ||||||| ||| ||| || |||| ||||||| |||| || |||| Sbjct 51983 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 52037 Query 8246 TTATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACATT 8305 | ||| ||| || | |||||||| || || || || ||||| ||||| |||| Sbjct 52038 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 52097 Query 8306 TCGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTA-AACACAGTTGTTaaaaaa 8364 | || ||||||| | |||||||| ||||| || || ||| ||||| || || || || Sbjct 52098 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAAG 52156 Query 8365 aTGCTCGATACATCTAATGGACAAGGGTTAGACGTTTACGACTATATCACAATGGCAAAT 8424 ||| | | | || |||||| || ||| || | | || || |||||| Sbjct 52157 ATGATGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAGGTGACCATAGCAAAT 52216 Query 8425 CATATAGATTATGAGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAATCCTGTCTTC 8484 ||| | ||||||||||| ||||| || |||||||||| |||| ||| |||| |||||| Sbjct 52217 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 52276 Query 8485 ACTGTCATGGGTCAGTTTCTAGGATATCCAAGCCTCATAACAAGAACACATGAGTTCTTT 8544 | |||||||||| ||| | |||| || | | | || ||||||||||| |||||| Sbjct 52277 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 52336 >seq9517 Length=2557 Score = 141 bits (156), Expect = 8e-30 Identities = 253/362 (70%), Gaps = 13/362 (4%) Strand=Plus/Plus Query 8188 GTAATCGGGCTGAGAGGAAAGGAA-AGA-GAAATCAAAAGGATAGGTCGATTCTTCGCTC 8245 || ||||| ||||||| ||| ||| || |||| ||||||| |||| || |||| Sbjct 564 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 618 Query 8246 TTATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACATT 8305 | ||| ||| || | |||||||| || || || || ||||| ||||| |||| Sbjct 619 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 678 Query 8306 TCGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTA-AACACAGTTGTTaaaaaa 8364 | || ||||||| | |||||||| ||||| || || ||| ||||| || || || || Sbjct 679 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTACAACACCGTAGTCAACAAG 737 Query 8365 aTGCTCGATACATCTAATGGACAAGGG--TTAGACGTTTACGACTATATCACAATGGCAA 8422 ||| | | | || |||||| | ||| ||| || | || || |||| Sbjct 738 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAG--TTATGATGAGGCGACCATAGCAA 795 Query 8423 ATCATATAGATTATGAGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAATCCTGTCT 8482 ||||| | ||||||||||| ||||| || |||||||||| |||| ||| |||| |||| Sbjct 796 ATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCT 855 Query 8483 TCACTGTCATGGGTCAGTTTCTAGGATATCCAAGCCTCATAACAAGAACACATGAGTTCT 8542 || | |||||||||| ||| | |||| || | | | || ||||||||||| |||| Sbjct 856 TCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCT 915 Query 8543 TT 8544 || Sbjct 916 TT 917 >seq8251 Length=2688 Score = 141 bits (156), Expect = 8e-30 Identities = 253/362 (70%), Gaps = 13/362 (4%) Strand=Plus/Plus Query 8188 GTAATCGGGCTGAGAGGAAAGGAA-AGA-GAAATCAAAAGGATAGGTCGATTCTTCGCTC 8245 || ||||| ||||||| ||| ||| || |||| ||||||| |||| || |||| Sbjct 239 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 293 Query 8246 TTATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACATT 8305 | ||| ||| || | |||||||| || || || || ||||| ||||| |||| Sbjct 294 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 353 Query 8306 TCGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTA-AACACAGTTGTTaaaaaa 8364 | || ||||||| | |||||||| ||||| || || ||| ||||| || || || || Sbjct 354 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAAG 412 Query 8365 aTGCTCGATACATCTAATGGACAAGGG--TTAGACGTTTACGACTATATCACAATGGCAA 8422 ||| | | | || |||||| | ||| ||| || | || || |||| Sbjct 413 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAG--TTATGATGAGGCGACCATAGCAA 470 Query 8423 ATCATATAGATTATGAGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAATCCTGTCT 8482 ||||| | ||||||||||| ||||| || |||||||||| |||| ||| |||| |||| Sbjct 471 ATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCT 530 Query 8483 TCACTGTCATGGGTCAGTTTCTAGGATATCCAAGCCTCATAACAAGAACACATGAGTTCT 8542 || | |||||||||| ||| | |||| || | | | || ||||||||||| |||| Sbjct 531 TCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCT 590 Query 8543 TT 8544 || Sbjct 591 TT 592 >seq1814 Length=63972 Score = 141 bits (156), Expect = 8e-30 Identities = 253/362 (70%), Gaps = 13/362 (4%) Strand=Plus/Plus Query 8188 GTAATCGGGCTGAGAGGAAAGGAA-AGA-GAAATCAAAAGGATAGGTCGATTCTTCGCTC 8245 || ||||| ||||||| ||| ||| || |||| ||||||| |||| || |||| Sbjct 1645 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 1699 Query 8246 TTATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACATT 8305 | ||| ||| || | |||||||| || || || || ||||| ||||| |||| Sbjct 1700 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 1759 Query 8306 TCGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTA-AACACAGTTGTTaaaaaa 8364 | || ||||||| | |||||||| ||||| || || ||| ||||| || || || || Sbjct 1760 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAAG 1818 Query 8365 aTGCTCGATACATCTAATGGACAAGGG--TTAGACGTTTACGACTATATCACAATGGCAA 8422 ||| | | | || |||||| | ||| ||| || | || || |||| Sbjct 1819 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAG--TTATGATGAGGCGACCATAGCAA 1876 Query 8423 ATCATATAGATTATGAGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAATCCTGTCT 8482 ||||| | ||||||||||| ||||| || |||||||||| |||| ||| |||| |||| Sbjct 1877 ATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCT 1936 Query 8483 TCACTGTCATGGGTCAGTTTCTAGGATATCCAAGCCTCATAACAAGAACACATGAGTTCT 8542 || | |||||||||| ||| | |||| || | | | || ||||||||||| |||| Sbjct 1937 TCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCT 1996 Query 8543 TT 8544 || Sbjct 1997 TT 1998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41805931438240