Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_033701.1 Length=11743 Score E Sequences producing significant alignments: (Bits) Value seq9517 118 8e-23 seq8251 114 1e-21 seq1814 114 1e-21 seq1440 114 1e-21 seq2296 84.2 2e-12 >seq9517 Length=2557 Score = 118 bits (130), Expect = 8e-23 Identities = 270/401 (67%), Gaps = 9/401 (2%) Strand=Plus/Plus Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760 || || || |||| | |||||| ||| ||| |||||||| |||||||| | | Sbjct 564 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 618 Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820 | ||| |||| || || |||||||| ||||||| || |||||||| ||| || Sbjct 619 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 678 Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880 |||| ||| | | |||| ||||||||||| ||||| ||||| | ||| | || || | Sbjct 679 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGA 738 Query 6881 TGTTGGACCGGGCGACAGGTCAAGGTGAATCTGA-TTACCAGTATATAACATTTGCAAAT 6939 || || | | | || | || | || || ||| | | || | |||||| Sbjct 739 TGATGCAAGCTTCATCTGGAC-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAAT 797 Query 6940 CATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTC 6999 ||| |||| ||| ||| ||||||||| |||| |||| | | ||||| || |||||| Sbjct 798 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 857 Query 7000 CTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACCCACGAGTTTTTT 7059 ||||||||| |||||| ||| |||| || | ||| ||||| || || || ||| Sbjct 858 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 917 Query 7060 GAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAAT 7100 | | | | || || || |||||| ||||||||| Sbjct 918 CGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 958 >seq8251 Length=2688 Score = 114 bits (126), Expect = 1e-21 Identities = 269/401 (67%), Gaps = 9/401 (2%) Strand=Plus/Plus Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760 || || || |||| | |||||| ||| ||| |||||||| |||||||| | | Sbjct 239 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 293 Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820 | ||| |||| || || |||||||| ||||||| || |||||||| ||| || Sbjct 294 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 353 Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880 |||| ||| | | |||| ||||||||||| ||||| || || | ||| | || || | Sbjct 354 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGA 413 Query 6881 TGTTGGACCGGGCGACAGGTCAAGGTGAATCTGA-TTACCAGTATATAACATTTGCAAAT 6939 || || | | | || | || | || || ||| | | || | |||||| Sbjct 414 TGATGCAAGCTTCATCTGGAC-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAAT 472 Query 6940 CATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTC 6999 ||| |||| ||| ||| ||||||||| |||| |||| | | ||||| || |||||| Sbjct 473 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 532 Query 7000 CTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACCCACGAGTTTTTT 7059 ||||||||| |||||| ||| |||| || | ||| ||||| || || || ||| Sbjct 533 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 592 Query 7060 GAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAAT 7100 | | | | || || || |||||| ||||||||| Sbjct 593 CGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 633 >seq1814 Length=63972 Score = 114 bits (126), Expect = 1e-21 Identities = 269/401 (67%), Gaps = 9/401 (2%) Strand=Plus/Plus Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760 || || || |||| | |||||| ||| ||| |||||||| |||||||| | | Sbjct 1645 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 1699 Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820 | ||| |||| || || |||||||| ||||||| || |||||||| ||| || Sbjct 1700 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 1759 Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880 |||| ||| | | |||| ||||||||||| ||||| || || | ||| | || || | Sbjct 1760 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGA 1819 Query 6881 TGTTGGACCGGGCGACAGGTCAAGGTGAATCTGA-TTACCAGTATATAACATTTGCAAAT 6939 || || | | | || | || | || || ||| | | || | |||||| Sbjct 1820 TGATGCAAGCTTCATCTGGAC-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAAT 1878 Query 6940 CATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTC 6999 ||| |||| ||| ||| ||||||||| |||| |||| | | ||||| || |||||| Sbjct 1879 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 1938 Query 7000 CTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACCCACGAGTTTTTT 7059 ||||||||| |||||| ||| |||| || | ||| ||||| || || || ||| Sbjct 1939 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 1998 Query 7060 GAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAAT 7100 | | | | || || || |||||| ||||||||| Sbjct 1999 CGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 2039 >seq1440 Length=90230 Score = 114 bits (126), Expect = 1e-21 Identities = 269/401 (67%), Gaps = 9/401 (2%) Strand=Plus/Plus Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760 || || || |||| | |||||| ||| ||| |||||||| |||||||| | | Sbjct 51983 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 52037 Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820 | ||| |||| || || |||||||| ||||||| || |||||||| ||| || Sbjct 52038 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 52097 Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880 |||| ||| | | |||| ||||||||||| ||||| || || | ||| | || || | Sbjct 52098 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGA 52157 Query 6881 TGTTGGACCGGGCGACAGGTCAAGGTGAATCTGA-TTACCAGTATATAACATTTGCAAAT 6939 || || | | | || | || | || | ||| | | | || | |||||| Sbjct 52158 TGATGCAAGCTTCATCTGGAC-AGACCACTCACAGTTATGATGAGGTGACCATAGCAAAT 52216 Query 6940 CATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTC 6999 ||| |||| ||| ||| ||||||||| |||| |||| | | ||||| || |||||| Sbjct 52217 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 52276 Query 7000 CTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACCCACGAGTTTTTT 7059 ||||||||| |||||| ||| |||| || | ||| ||||| || || || ||| Sbjct 52277 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 52336 Query 7060 GAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAAT 7100 | | | | || || || |||||| ||||||||| Sbjct 52337 CGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 52377 >seq2296 Length=40579 Score = 84.2 bits (92), Expect = 2e-12 Identities = 131/185 (71%), Gaps = 7/185 (4%) Strand=Plus/Plus Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760 || || || |||| | |||||| ||| ||| |||||||| |||||||| | | Sbjct 1708 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 1762 Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820 | ||| |||| || || |||||||| ||||||| || |||||||| ||| || Sbjct 1763 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 1822 Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880 |||| ||| | | |||| ||||||||||| ||||| ||||| | ||| | || || | Sbjct 1823 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGA 1882 Query 6881 TGTTG 6885 || || Sbjct 1883 TGATG 1887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37441078743320