Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_033701.1
Length=11743
Score E
Sequences producing significant alignments: (Bits) Value
seq9517 118 8e-23
seq8251 114 1e-21
seq1814 114 1e-21
seq1440 114 1e-21
seq2296 84.2 2e-12
>seq9517
Length=2557
Score = 118 bits (130), Expect = 8e-23
Identities = 270/401 (67%), Gaps = 9/401 (2%)
Strand=Plus/Plus
Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760
|| || || |||| | |||||| ||| ||| |||||||| |||||||| | |
Sbjct 564 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 618
Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820
| ||| |||| || || |||||||| ||||||| || |||||||| ||| ||
Sbjct 619 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 678
Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880
|||| ||| | | |||| ||||||||||| ||||| ||||| | ||| | || || |
Sbjct 679 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGA 738
Query 6881 TGTTGGACCGGGCGACAGGTCAAGGTGAATCTGA-TTACCAGTATATAACATTTGCAAAT 6939
|| || | | | || | || | || || ||| | | || | ||||||
Sbjct 739 TGATGCAAGCTTCATCTGGAC-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAAT 797
Query 6940 CATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTC 6999
||| |||| ||| ||| ||||||||| |||| |||| | | ||||| || ||||||
Sbjct 798 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 857
Query 7000 CTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACCCACGAGTTTTTT 7059
||||||||| |||||| ||| |||| || | ||| ||||| || || || |||
Sbjct 858 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 917
Query 7060 GAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAAT 7100
| | | | || || || |||||| |||||||||
Sbjct 918 CGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 958
>seq8251
Length=2688
Score = 114 bits (126), Expect = 1e-21
Identities = 269/401 (67%), Gaps = 9/401 (2%)
Strand=Plus/Plus
Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760
|| || || |||| | |||||| ||| ||| |||||||| |||||||| | |
Sbjct 239 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 293
Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820
| ||| |||| || || |||||||| ||||||| || |||||||| ||| ||
Sbjct 294 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 353
Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880
|||| ||| | | |||| ||||||||||| ||||| || || | ||| | || || |
Sbjct 354 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGA 413
Query 6881 TGTTGGACCGGGCGACAGGTCAAGGTGAATCTGA-TTACCAGTATATAACATTTGCAAAT 6939
|| || | | | || | || | || || ||| | | || | ||||||
Sbjct 414 TGATGCAAGCTTCATCTGGAC-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAAT 472
Query 6940 CATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTC 6999
||| |||| ||| ||| ||||||||| |||| |||| | | ||||| || ||||||
Sbjct 473 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 532
Query 7000 CTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACCCACGAGTTTTTT 7059
||||||||| |||||| ||| |||| || | ||| ||||| || || || |||
Sbjct 533 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 592
Query 7060 GAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAAT 7100
| | | | || || || |||||| |||||||||
Sbjct 593 CGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 633
>seq1814
Length=63972
Score = 114 bits (126), Expect = 1e-21
Identities = 269/401 (67%), Gaps = 9/401 (2%)
Strand=Plus/Plus
Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760
|| || || |||| | |||||| ||| ||| |||||||| |||||||| | |
Sbjct 1645 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 1699
Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820
| ||| |||| || || |||||||| ||||||| || |||||||| ||| ||
Sbjct 1700 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 1759
Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880
|||| ||| | | |||| ||||||||||| ||||| || || | ||| | || || |
Sbjct 1760 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGA 1819
Query 6881 TGTTGGACCGGGCGACAGGTCAAGGTGAATCTGA-TTACCAGTATATAACATTTGCAAAT 6939
|| || | | | || | || | || || ||| | | || | ||||||
Sbjct 1820 TGATGCAAGCTTCATCTGGAC-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAAT 1878
Query 6940 CATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTC 6999
||| |||| ||| ||| ||||||||| |||| |||| | | ||||| || ||||||
Sbjct 1879 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 1938
Query 7000 CTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACCCACGAGTTTTTT 7059
||||||||| |||||| ||| |||| || | ||| ||||| || || || |||
Sbjct 1939 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 1998
Query 7060 GAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAAT 7100
| | | | || || || |||||| |||||||||
Sbjct 1999 CGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 2039
>seq1440
Length=90230
Score = 114 bits (126), Expect = 1e-21
Identities = 269/401 (67%), Gaps = 9/401 (2%)
Strand=Plus/Plus
Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760
|| || || |||| | |||||| ||| ||| |||||||| |||||||| | |
Sbjct 51983 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 52037
Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820
| ||| |||| || || |||||||| ||||||| || |||||||| ||| ||
Sbjct 52038 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 52097
Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880
|||| ||| | | |||| ||||||||||| ||||| || || | ||| | || || |
Sbjct 52098 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGA 52157
Query 6881 TGTTGGACCGGGCGACAGGTCAAGGTGAATCTGA-TTACCAGTATATAACATTTGCAAAT 6939
|| || | | | || | || | || | ||| | | | || | ||||||
Sbjct 52158 TGATGCAAGCTTCATCTGGAC-AGACCACTCACAGTTATGATGAGGTGACCATAGCAAAT 52216
Query 6940 CATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTC 6999
||| |||| ||| ||| ||||||||| |||| |||| | | ||||| || ||||||
Sbjct 52217 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 52276
Query 7000 CTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACCCACGAGTTTTTT 7059
||||||||| |||||| ||| |||| || | ||| ||||| || || || |||
Sbjct 52277 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 52336
Query 7060 GAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAAT 7100
| | | | || || || |||||| |||||||||
Sbjct 52337 CGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 52377
>seq2296
Length=40579
Score = 84.2 bits (92), Expect = 2e-12
Identities = 131/185 (71%), Gaps = 7/185 (4%)
Strand=Plus/Plus
Query 6703 GTCATTGGACTGAAGGGAAAAGA-GAGA-GAAGTTAAAAGGATTGGTCGAtttttttCAC 6760
|| || || |||| | |||||| ||| ||| |||||||| |||||||| | |
Sbjct 1708 GTGATCGGTCTGAGAGCAAAAGAAGAGCTGAAACTAAAAGGAA-----GATTTTTTGCTC 1762
Query 6761 TAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTT 6820
| ||| |||| || || |||||||| ||||||| || |||||||| ||| ||
Sbjct 1763 TCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATT 1822
Query 6821 TTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAA 6880
|||| ||| | | |||| ||||||||||| ||||| ||||| | ||| | || || |
Sbjct 1823 TTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGA 1882
Query 6881 TGTTG 6885
|| ||
Sbjct 1883 TGATG 1887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 37441078743320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |