Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_033705.1
Length=11731
Score E
Sequences producing significant alignments: (Bits) Value
seq9517 84.2 2e-12
seq8251 84.2 2e-12
seq1814 84.2 2e-12
seq1440 84.2 2e-12
>seq9517
Length=2557
Score = 84.2 bits (92), Expect = 2e-12
Identities = 131/187 (70%), Gaps = 3/187 (2%)
Strand=Plus/Plus
Query 6695 TAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATC 6754
|||| |||||| ||||||| || ||||| || |||| |||| | | |||| |||
Sbjct 790 TAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATC 849
Query 6755 CTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATG 6814
| ||||| ||| ||||||| |||||| || || || ||| | ||| || || ||||
Sbjct 850 CGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATG 909
Query 6815 AATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAG 6874
|||||||| | | || ||||||| || || || |||| || || ||||| ||
Sbjct 910 AATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT---AGTTATAG 966
Query 6875 GAGGTGA 6881
||| ||
Sbjct 967 AAGGAGA 973
>seq8251
Length=2688
Score = 84.2 bits (92), Expect = 2e-12
Identities = 131/187 (70%), Gaps = 3/187 (2%)
Strand=Plus/Plus
Query 6695 TAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATC 6754
|||| |||||| ||||||| || ||||| || |||| |||| | | |||| |||
Sbjct 465 TAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATC 524
Query 6755 CTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATG 6814
| ||||| ||| ||||||| |||||| || || || ||| | ||| || || ||||
Sbjct 525 CGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATG 584
Query 6815 AATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAG 6874
|||||||| | | || ||||||| || || || |||| || || ||||| ||
Sbjct 585 AATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT---AGTTATAG 641
Query 6875 GAGGTGA 6881
||| ||
Sbjct 642 AAGGAGA 648
>seq1814
Length=63972
Score = 84.2 bits (92), Expect = 2e-12
Identities = 131/187 (70%), Gaps = 3/187 (2%)
Strand=Plus/Plus
Query 6695 TAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATC 6754
|||| |||||| ||||||| || ||||| || |||| |||| | | |||| |||
Sbjct 1871 TAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATC 1930
Query 6755 CTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATG 6814
| ||||| ||| ||||||| |||||| || || || ||| | ||| || || ||||
Sbjct 1931 CGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATG 1990
Query 6815 AATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAG 6874
|||||||| | | || ||||||| || || || |||| || || ||||| ||
Sbjct 1991 AATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT---AGTTATAG 2047
Query 6875 GAGGTGA 6881
||| ||
Sbjct 2048 AAGGAGA 2054
>seq1440
Length=90230
Score = 84.2 bits (92), Expect = 2e-12
Identities = 131/187 (70%), Gaps = 3/187 (2%)
Strand=Plus/Plus
Query 6695 TAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATC 6754
|||| |||||| ||||||| || ||||| || |||| |||| | | |||| |||
Sbjct 52209 TAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATC 52268
Query 6755 CTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATG 6814
| ||||| ||| ||||||| |||||| || || || ||| | ||| || || ||||
Sbjct 52269 CGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATG 52328
Query 6815 AATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAG 6874
|||||||| | | || ||||||| || || || |||| || ||| |||| ||
Sbjct 52329 AATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAATG---GTTATAG 52385
Query 6875 GAGGTGA 6881
||| ||
Sbjct 52386 AAGGAGA 52392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 37402700598200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |