Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_033705.1 Length=11731 Score E Sequences producing significant alignments: (Bits) Value seq9517 84.2 2e-12 seq8251 84.2 2e-12 seq1814 84.2 2e-12 seq1440 84.2 2e-12 >seq9517 Length=2557 Score = 84.2 bits (92), Expect = 2e-12 Identities = 131/187 (70%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 6695 TAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATC 6754 |||| |||||| ||||||| || ||||| || |||| |||| | | |||| ||| Sbjct 790 TAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATC 849 Query 6755 CTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATG 6814 | ||||| ||| ||||||| |||||| || || || ||| | ||| || || |||| Sbjct 850 CGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATG 909 Query 6815 AATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAG 6874 |||||||| | | || ||||||| || || || |||| || || ||||| || Sbjct 910 AATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT---AGTTATAG 966 Query 6875 GAGGTGA 6881 ||| || Sbjct 967 AAGGAGA 973 >seq8251 Length=2688 Score = 84.2 bits (92), Expect = 2e-12 Identities = 131/187 (70%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 6695 TAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATC 6754 |||| |||||| ||||||| || ||||| || |||| |||| | | |||| ||| Sbjct 465 TAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATC 524 Query 6755 CTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATG 6814 | ||||| ||| ||||||| |||||| || || || ||| | ||| || || |||| Sbjct 525 CGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATG 584 Query 6815 AATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAG 6874 |||||||| | | || ||||||| || || || |||| || || ||||| || Sbjct 585 AATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT---AGTTATAG 641 Query 6875 GAGGTGA 6881 ||| || Sbjct 642 AAGGAGA 648 >seq1814 Length=63972 Score = 84.2 bits (92), Expect = 2e-12 Identities = 131/187 (70%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 6695 TAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATC 6754 |||| |||||| ||||||| || ||||| || |||| |||| | | |||| ||| Sbjct 1871 TAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATC 1930 Query 6755 CTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATG 6814 | ||||| ||| ||||||| |||||| || || || ||| | ||| || || |||| Sbjct 1931 CGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATG 1990 Query 6815 AATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAG 6874 |||||||| | | || ||||||| || || || |||| || || ||||| || Sbjct 1991 AATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT---AGTTATAG 2047 Query 6875 GAGGTGA 6881 ||| || Sbjct 2048 AAGGAGA 2054 >seq1440 Length=90230 Score = 84.2 bits (92), Expect = 2e-12 Identities = 131/187 (70%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 6695 TAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATC 6754 |||| |||||| ||||||| || ||||| || |||| |||| | | |||| ||| Sbjct 52209 TAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATC 52268 Query 6755 CTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATG 6814 | ||||| ||| ||||||| |||||| || || || ||| | ||| || || |||| Sbjct 52269 CGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATG 52328 Query 6815 AATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAG 6874 |||||||| | | || ||||||| || || || |||| || ||| |||| || Sbjct 52329 AATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAATG---GTTATAG 52385 Query 6875 GAGGTGA 6881 ||| || Sbjct 52386 AAGGAGA 52392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37402700598200