Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8504 432 3e-116 seq6779 232 5e-56 >seq8504 Length=8995 Score = 432 bits (478), Expect = 3e-116 Identities = 1212/1842 (66%), Gaps = 35/1842 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || ||||| |||||||| ||||| | |||| |||||| | |||||||||||||| || Sbjct 3124 TCCACCGTAAACTGGATTGCATTCACGGCCGGCTTGGTACGCAGATAGTACATGCCAGTT 3065 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || ||| | |||||||| ||||| | | || |||| || ||||| Sbjct 3064 TTCAACCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCC 3005 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCCAT 65256 || || || || || ||||| || ||||||||| |||| ||||||||||| ||||| Sbjct 3004 GCGACGTGAATGTTGAACGATTGCGACTGATCGATA-AACGCGCCACGATCTGCGGCCAT 2946 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| || |||| |||||||| || || ||||||||| || | || Sbjct 2945 TTTGATGC-ACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTCCT 2887 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGAT-TACGCAT 65373 || || || | || | |||| || ||| | | || | | || | | | | Sbjct 2886 GCGGTATAGCCGCTATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCATGT 2827 Query 65374 CGAC-TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 ||| || ||||| ||||| | | | | || || | | ||| | || | || | Sbjct 2826 CGAGATC---CCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 2770 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| ||||| || || | || | ||| |||||| || || || |||| Sbjct 2769 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 2710 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || ||||||| |||||||| || || || || || ||||| || || | || || || | Sbjct 2709 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 2650 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612 | || | |||| | | | || || | ||| ||| |||||||||||| | | Sbjct 2649 TGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACA---GATC-- 2595 Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672 ||||| ||| | |||||| || | ||||| | || | || |||| || Sbjct 2594 CGTCGGT-TCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGGCTGCCCT 2536 Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732 | | | |||||| || || ||| || | |||||| | || |||||| | Sbjct 2535 CGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTCACAGCTCGCTTCCAGTGCGCCGT 2476 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 | || ||||| ||||| || | |||| || | | ||||| ||||| |||||||| | Sbjct 2475 AGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGG-A 2417 Query 65793 TACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || | |||||||| || | ||||||| || || || || || ||||| || | || Sbjct 2416 TAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATGCCGATCGGTCTGTGG 2357 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| |||||| || | ||||| || || || |||||||||| ||| || || ||| Sbjct 2356 CGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTC 2297 Query 65912 AAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAGG 65970 | |||||| ||||| | ||| | | | || | | | || ||| | |||| | Sbjct 2296 AGATTGCGCGTCACTGTCTTAGCGACTTCCTT-CAGCTTTGCAAAGTCATAC-GTTTTG- 2240 Query 65971 ACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGAC 66030 || | | |||||| || | ||| | || || || ||||| || Sbjct 2239 ----TCTTGCTTT---------ACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATAC 2193 Query 66031 AGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTAT 66090 |||| ||| || | | ||||| ||||| || |||||||| || || || Sbjct 2192 CGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTGCACAGGTTGGAACATTTGAT 2133 Query 66091 GGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGG 66150 |||||| | |||||| || ||||| || |||||||| ||||||||||||| ||||||||| Sbjct 2132 GGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGG 2073 Query 66151 AGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT 66210 |||||| || || || || || ||||| || ||| ||| | | ||||||||| Sbjct 2072 TACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTG 2013 Query 66211 ACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCA 66270 || | | ||| | ||||| ||| || | ||||| ||| ||||| Sbjct 2012 CCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCA 1953 Query 66271 TACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTC 66330 || || || | ||||| | ||| || |||||||| ||| | | | || Sbjct 1952 GGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTC 1893 Query 66331 TACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTG 66390 ||||| |||| || || || ||||||||||| ||||| || | || ||||| || Sbjct 1892 CACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGAC 1833 Query 66391 CTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 |||||| ||||| ||||| || ||||| ||||| || || ||| ||||||| || Sbjct 1832 CTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACGG 1773 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 || || ||||||||||| | || || ||| |||||| || |||||||| || || Sbjct 1772 CTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGC 1713 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 ||||||| |||| |||| |||||| || || ||||| || | || || || ||| Sbjct 1712 CGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGA 1653 Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 |||| | ||| || || ||| ||| || ||||| || || |||||||||| || Sbjct 1652 GATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGATTT 1593 Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690 ||| || |||||| | || || | | ||||| |||||| || | || Sbjct 1592 CGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACAT 1533 Query 66691 GGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGG 66750 ||||| ||| |||| || ||| ||||| | || || || | || | ||| || Sbjct 1532 GGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCGCAGCAAACATGGTTGG 1473 Query 66751 TGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAAT 66810 | ||||| || |||||| | |||| |||||| |||||||| | ||||| || Sbjct 1472 CGAGGCGTGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGAT 1413 Query 66811 GTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAG 66870 || |||||||| || || | ||| |||||||| | || || || || ||||| | Sbjct 1412 GTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGAT 1353 Query 66871 CCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 ||||||| | || ||||| || ||||||| ||| || Sbjct 1352 TTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTT 1311 >seq6779 Length=15061 Score = 232 bits (256), Expect = 5e-56 Identities = 214/268 (80%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||| |||| Sbjct 2586 AGGCGGAAGCTTCCTTCTGGACGGTGGAAGAGGTTGATCTGTCCAAGGACATGAAGGACT 2645 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 ||||| || | | |||||| ||| || ||||| || ||| |||| ||||||| Sbjct 2646 GGGAGACGCTGAAACCGAGCG---AACGCCACTTCATCTCCCACGTGCTGGCCTTCTTTG 2702 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| || ||||||||||| || |||||| | ||||||| ||| ||||||||||| | Sbjct 2703 CCGCGTCCGACGGTATCGTGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGG 2762 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | |||| ||||| || |||||||||||||||||||| ||||| ||||| ||| |||| Sbjct 2763 TTACGGAAGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGTGAGA 2822 Query 61343 TGTACAGTGTTCTCATCGATACGTACAT 61370 ||||| | || ||||| |||||||| Sbjct 2823 TGTACTCGCTGCTGATCGACACGTACAT 2850 Score = 224 bits (248), Expect = 8e-54 Identities = 310/433 (72%), Gaps = 3/433 (1%) Strand=Plus/Plus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||||||||| ||| | ||| |||||| |||| ||||| ||||| | || | Sbjct 2973 TGTTCAATGCCATCGAAACGCTGCCGTGCGTGAAGAGGAAGGCGGACTGGGCGCTGAACT 3032 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | ||| | ||||| || || | ||||||| || | ||| |||| Sbjct 3033 GGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGG 3092 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 || | || ||||| || || ||||| ||||| ||| ||||||| ||||| || |||| Sbjct 3093 GTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGC 3152 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | || || |||||| || ||| |||| || |||||||| || |||| || || |||| Sbjct 3153 CGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTG 3212 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | || | ||||| ||||||||| | |||||| ||||||| ||| |||| Sbjct 3213 CCTGCCTGATGTTCAA---GTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGAGA 3269 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 | | || || ||||| ||||| ||||| || ||||| | || |||| || Sbjct 3270 TCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGGATA 3329 Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 | | |||||||| |||| || ||||||||||| ||||| ||||| ||||| ||| || Sbjct 3330 TGCTTGGCATGAACTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTTTGC 3389 Query 61817 TGGTCGATTTGGG 61829 || |||| |||| Sbjct 3390 TGCTCGAGCTGGG 3402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397469983212560