Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq992 104 1e-16 seq3725 89.7 2e-12 >seq992 Length=27963 Score = 104 bits (114), Expect = 1e-16 Identities = 176/254 (69%), Gaps = 12/254 (5%) Strand=Plus/Plus Query 626199 TCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGACC 626258 |||| |||| ||| | ||| ||| | ||||| | || | ||| | ||| |||||||| Sbjct 22886 TCGACTGGGCGGAGTGCTTCATGGCGATGGCCTTCCTGGCCGCCAAACGCAGCAAGGACC 22945 Query 626259 CCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGGCT 626318 || || |||||||| || |||||||| ||||||||||| || ||||| || || | Sbjct 22946 CCTCGACACAGGTCGGTGCGTGCATCGTGAACGAGGACAACCGTATCGTGGGCATCGGGT 23005 Query 626319 ACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGGAAGCGCGATAGCGCAT 626378 ||||||| || || ||||||| |||||||| || || ||| ||| | || Sbjct 23006 ACAACGGATTTCCCAAGGGCTGCAGTGACGACGAGTTCCCGTGG----TCGAAAACG--- 23058 Query 626379 GTGAGGACATT---CTCGACAGCAAGAGCCTCTATGTGGTTCACGCCGAACTCAACGCCA 626435 ||||| | ||||| | ||| ||| || ||| ||||| || | ||||| | Sbjct 23059 --TCGGACAATCCGCTCGAGACGAAGTACCTGTACGTGTGCCACGCGGAGGTGAACGCAA 23116 Query 626436 TCCTCAACAAGAAC 626449 | || ||||||||| Sbjct 23117 TACTGAACAAGAAC 23130 >seq3725 Length=17844 Score = 89.7 bits (98), Expect = 2e-12 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 21735 TGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACC 21794 || ||||||||||| || | ||| | |||||||| || ||||| ||||| || || Sbjct 16807 TGTGCGATGCGATCACCTTTCTTAACTTCAAAGTTTGTCTCCGAGTGATTGAACAGTACA 16866 Query 21795 ACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGGCGCCGACGTCGAGCCCGTTC 21854 || ||||| || |||| || ||||||||| |||||||| || |||| ||| Sbjct 16867 ACTCCGACGTTACCCCGGTAGTCTTCGTCGACGACACCGGCGCCCACATCGATGAAGTTT 16926 Query 21855 TTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAG 21893 |||| ||||| ||| || | ||||| || ||||| ||| Sbjct 16927 TTCACGGCCAAACCGGAACGTGGAGCCACTCGGCCATAG 16965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084185690015742