Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq24 416 2e-111 seq3 233 2e-56 >seq24 Length=2561919 Score = 416 bits (460), Expect = 2e-111 Identities = 1211/1846 (66%), Gaps = 43/1846 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || ||||| |||||||||||||| | |||| |||||| | |||||||||||||| || Sbjct 1154699 TCCACCGTAAACTGGATCGCATTCACGGCCGGCTTGGTACGCAGATAGTACATGCCAGTT 1154640 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || ||| | |||||||| ||||| | | || |||| || ||||| Sbjct 1154639 TTCAACCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCC 1154580 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 || || || || || ||||| || ||||||||| |||| |||||||||||| ||||| Sbjct 1154579 GCGACGTGAATGTTGAACGATTGCGACTGATCGATA-AACGCACCACGATCTGCGGCCAT 1154521 Query 65257 GTCAATGATACGACGTC----CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCT 65312 | |||| | |||| |||| |||||||| || || ||||||||| || | | Sbjct 1154520 TT---TGATGC-ACGTTTTAACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTT 1154465 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGAT-TACG 65370 | || || || |||| | |||| || ||| | | || | | || | | | Sbjct 1154464 CCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 1154405 Query 65371 CATCGAC-TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGA 65429 |||| || ||||| ||||| | | | | || || | | ||| | || | | Sbjct 1154404 TGTCGAGATC---CCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCA 1154348 Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 | ||||||||||| |||| || || | || | ||| |||||| || || || | Sbjct 1154347 CCTGGAACTCGCCCGACAACACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACG 1154288 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 ||||| ||||||| |||||||| || || || || || ||||| || || | || || | Sbjct 1154287 ATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATTGGGGCCAACAGCAGCG 1154228 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTT 65609 | || || | |||| | || | || || | ||| ||| |||||||||||| | | Sbjct 1154227 AATTGCGAATACCGTGCTTTGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACA---GAT 1154171 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 ||||| ||| | |||||| || | ||||| | || | || |||| | Sbjct 1154170 C--CGTCGGT-TCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGGCTGC 1154114 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGG 65729 | | | | |||||| || || ||| | | |||||| | || || ||| Sbjct 1154113 CCTCGTACGTCTCGTACGGGCCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGC 1154054 Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789 | | || ||||| ||||| || | |||| || | | ||||| ||||| ||||||| Sbjct 1154053 CGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACG 1153994 Query 65790 GCATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 | ||| | ||| |||| || | ||||||| || || || || || ||||| || | Sbjct 1153993 G-ATAGCGCATTAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTG 1153935 Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 || |||| |||||| || | ||||| || || || |||||||||| ||| || || Sbjct 1153934 TGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTG 1153875 Query 65909 TTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTT 65967 |||| |||||| || || | ||| | | | || | | | || ||| | ||| Sbjct 1153874 TTCAGATTGCGCGTTACTGTCTTAGCGACTTCCTT-CAGCTTTGCAAAGTCATACGTTTT 1153816 Query 65968 AGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027 | || | | |||||| || | ||| | || || || ||||| Sbjct 1153815 A------TCTTGCTTT---------ACAAACATGTTCAAGGCGATCGAGGCCAGATTGCA 1153771 Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087 || |||| ||| || | | ||||| |||||||| ||||||| || || Sbjct 1153770 TACCGCTACCTCATCCTTCGACGAGTACTCCACAATTTCAGTGCACAAGTTGGAACATTT 1153711 Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147 |||||||| | |||||| || ||||| || |||||||| ||||||||||||| |||||| Sbjct 1153710 GATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTA 1153651 Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207 ||| |||||| || || || || || ||||| || ||| ||| | | |||||||| Sbjct 1153650 CGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCAC 1153591 Query 66208 CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 | || | | ||| | ||||| | ||| || | ||||| ||| || Sbjct 1153590 CTGCCGCATAAAGCGACCCTCTTTCTCGTACTCCGTGTACAGCTTCTCGAACTCTTCGCC 1153531 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 ||| || || |||| ||||| | ||| || |||||||| ||| | | | Sbjct 1153530 CCAGGTGTCCGATAGACCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGC 1153471 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 || ||||| ||| || || || |||||||| || ||||| || | || ||||| || Sbjct 1153470 CTCCACACGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAAAACATGTCCCGTGCGCG 1153411 Query 66388 TTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 |||||| |||| ||| ||||| || ||||| ||||| || || ||| |||||| Sbjct 1153410 GACCTCCTCCTTGCCAGTG-TTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCC 1153352 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 | || || || ||||||||||| | || || ||| |||||| || |||||||| | Sbjct 1153351 AGGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACC 1153292 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 | || ||||||| |||| || | |||||| || || ||||| || | || || |||| Sbjct 1153291 GTGCCGTATTGTTGTAGACGCGTAGCATCGGCACCAGACCGTTTGAAATCCCGTTCGTGC 1153232 Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626 || |||| | ||| || || ||| ||| || ||||| || || |||||||||| Sbjct 1153231 CGGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCG 1153172 Query 66627 TCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 ||| || || || || | || ||| | | ||||| |||||| || | Sbjct 1153171 ACTTTGAAATTAGGGCGCACTGCTTCAGTGTGTCGTAGATGCCCTCAATGCTATCTTCGG 1153112 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 ||||||| ||| | || || ||| ||||| | || || |||| || | | Sbjct 1153111 ACATGGTCAACAGGAAACAGGACGAAAGCTGGGGACGCTGCGTAGCCGCCGCAAACATAG 1153052 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||||| ||||| ||| | |||| |||||| |||||||| | |||| Sbjct 1153051 TTGGCGAGGCGTGGGTAAAATAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCAT 1152992 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866 | |||| |||||||| || || | ||| |||||||| | || || || || |||| Sbjct 1152991 CGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGA 1152932 Query 66867 CCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 | | ||||||| | || ||||| || ||||||| ||| || Sbjct 1152931 CGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTT 1152886 >seq3 Length=6534354 Score = 233 bits (258), Expect = 2e-56 Identities = 215/269 (80%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||| |||| Sbjct 4991745 AGGCGGAAGCTTCCTTCTGGACGGTGGAAGAGGTTGATCTGTCCAAGGACATGAAGGACT 4991686 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 ||||| || | | |||||| ||| || ||||| || ||| |||| ||||||| Sbjct 4991685 GGGAGACGCTGAAACCGAGCG---AACGCCACTTCATCTCCCACGTGCTGGCCTTCTTTG 4991629 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| || ||||||||||| || |||||| | ||||||| ||| ||||||||||| | Sbjct 4991628 CCGCGTCCGACGGTATCGTGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGG 4991569 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | |||| ||||| || |||||||||||||||||||| ||||| ||||| ||| |||| Sbjct 4991568 TTACGGAAGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGA 4991509 Query 61343 TGTACAGTGTTCTCATCGATACGTACATC 61371 ||||| | || ||||| ||||||||| Sbjct 4991508 TGTACTCGCTGCTGATCGACACGTACATC 4991480 Score = 224 bits (248), Expect = 8e-54 Identities = 310/433 (72%), Gaps = 3/433 (1%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||||||||| ||| | ||| |||||| |||| ||||| ||||| | || | Sbjct 4991349 TGTTCAATGCCATCGAAACGCTGCCGTGCGTGAAGAGGAAGGCGGACTGGGCGCTGAACT 4991290 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | ||| | ||||| || || | ||||||| || | ||| |||| Sbjct 4991289 GGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGG 4991230 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 || | || ||||| || || ||||| ||||| ||| ||||||| ||||| || |||| Sbjct 4991229 GTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGC 4991170 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | || || |||||| || ||| |||| || |||||||| || |||| || || |||| Sbjct 4991169 CGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTG 4991110 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | || | ||||| ||||||||| | |||||| ||||||| ||| |||| Sbjct 4991109 CCTGCCTGATGTTCAA---GTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGAGA 4991053 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 | | || || ||||| ||||| ||||| || ||||| | || |||| || Sbjct 4991052 TCATCCGCGATGCGGTGCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGGATA 4990993 Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 | |||||||||| |||| || ||||||||||| ||||| ||||| ||||| || || Sbjct 4990992 TGCTCGGCATGAACTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGCTTGC 4990933 Query 61817 TGGTCGATTTGGG 61829 || |||| |||| Sbjct 4990932 TGCTCGAGCTGGG 4990920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558178455280