Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq24 102 3e-16 seq96 100 1e-15 >seq24 Length=2561919 Score = 102 bits (112), Expect = 3e-16 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 21735 TGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACC 21794 || ||||||||||| || | ||| | |||||||| | ||||| || ||||| || || Sbjct 2173651 TGTGCGATGCGATCACCTTTCTTAACTTCAAAGTTGTTCTCAGAATGATTGAACAGTACT 2173710 Query 21795 ACCCCGACCTTGCCCCTATAAGAACT-GTCGACGACCCCGGCGCCGACGTCGAGCCCGTT 21853 || ||||| ||||||| | || || ||||||||| |||||||| || |||| ||| Sbjct 2173711 ACTCCGACGTTGCCCCGGT-AGTCCTCGTCGACGACACCGGCGCCCACATCGATGAAGTT 2173769 Query 21854 CTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAG 21893 |||| ||||| ||| || | ||||| || ||||| ||| Sbjct 2173770 TTTCACGGCCAAACCGGAACGTGGAGCCACCCGGCCATAG 2173809 >seq96 Length=789507 Score = 100 bits (110), Expect = 1e-15 Identities = 175/254 (69%), Gaps = 12/254 (5%) Strand=Plus/Plus Query 626199 TCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGACC 626258 |||| |||| ||| | ||| ||| | ||||| | || | || | ||| |||||||| Sbjct 289128 TCGACTGGGCGGAGTGCTTCATGGCGATGGCCTTCCTGGCCGCGAAACGCAGCAAGGACC 289187 Query 626259 CCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGGCT 626318 || || |||||||| || |||||||| ||||||||||| || ||||| || || | Sbjct 289188 CCTCGACACAGGTCGGTGCGTGCATCGTGAACGAGGACAACCGTATCGTGGGCATCGGGT 289247 Query 626319 ACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGGAAGCGCGATAGCGCAT 626378 ||||||| || || ||||||| |||||||| || || ||| ||| | || Sbjct 289248 ACAACGGATTTCCCAAGGGCTGCAGTGACGACGAGTTCCCGTGG----TCGAAAACG--- 289300 Query 626379 GTGAGGACATT---CTCGACAGCAAGAGCCTCTATGTGGTTCACGCCGAACTCAACGCCA 626435 ||||| | ||||| | ||| ||| || ||| ||||| || | ||||| | Sbjct 289301 --TCGGACAATCCGCTCGAGACGAAGTACCTGTACGTGTGCCACGCGGAGGTGAACGCGA 289358 Query 626436 TCCTCAACAAGAAC 626449 | || ||||||||| Sbjct 289359 TACTGAACAAGAAC 289372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084683736816546