Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 >seq3 Length=6534354 Score = 111 bits (122), Expect = 2e-19 Identities = 344/525 (66%), Gaps = 8/525 (2%) Strand=Plus/Minus Query 162316 GAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAGCCTGAATAC 162375 |||||||| || || | || ||||| ||||| ||| |||| || |||| | || ||| Sbjct 5694826 GAAATATACAATCTGGCCGCCCAGAGCCACGTGAAGATTTCGTTCGATCTGAGCGAGTAC 5694767 Query 162376 ACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGGT 162435 || || || || || | || || || || |||| || ||| ||||| | || Sbjct 5694766 ACGGCCGAGGTGGATGCGGTCGGTACGCTGCGGCTGCTCGATGCCATCCGTACGGTGGGG 5694707 Query 162436 ATGGAATCATACG-TAAGAATCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCA 162494 ||| | ||| | | ||||||| || || ||||| || || || Sbjct 5694706 CAGGAG-CGGACGGTCCGCTTCTACCAGGCATCGACGTCCGAGCTGTACGGCAAGGTGGC 5694648 Query 162495 GGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAA 162554 |||||| |||||||| |||| || || | ||||| || || || || | ||| || Sbjct 5694647 GGAGACGCCCCAGAACGAAAAGACCCCGTTCTATCCCCGCTCGCCGTACGCGTGTGCCAA 5694588 Query 162555 ACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAG 162614 | || |||| |||||| | | ||||| | ||| || || || |||| | Sbjct 5694587 GATGTACGGGTACTGGATTGTGATCAACTATCGCGAAGCGTACGATATGTTCGCCTGCAA 5694528 Query 162615 CGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGAT 162674 ||| || || ||||||||||| | ||| | || |||| ||||| || ||||| || Sbjct 5694527 CGGCATCCTGTTCAATCACGAGTCGCCGCGCCGGGGGGAGAATTTCGTGACGCGCAAAAT 5694468 Query 162675 CGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAA-AGTGATCTACAACTTGGAAACC 162733 | ||| | || || ||| | || | || ||| | || | || || || | Sbjct 5694467 CACCCGCTCGGTGGCCAAGATTTCGCTCGGCCAGCAGGAGT-ACCTGGAGCTGGGCAATC 5694409 Query 162734 TCAATGCCCGA--CGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGAT 162791 || | | ||| ||||||||||| ||||| || || ||||||||||| |||||| | || Sbjct 5694408 TCGA--CTCGAAGCGTGACTGGGGCCACGCGAAGGATTACGTAGAGGCGATGTGGCTCAT 5694351 Query 162792 GCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGA 162836 | | ||||| ||| ||| || |||| ||||||||||| || || Sbjct 5694350 GATGCAGCAGGAGCGGCCGGAAGATTTCGTGATCGCAACGGGCGA 5694306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691441680152520