Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq113 390 9e-104 seq112 203 3e-47 >seq113 Length=1764599 Score = 390 bits (432), Expect = 9e-104 Identities = 1212/1854 (65%), Gaps = 55/1854 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || |||||||||||||| |||||| | |||| |||||| | | |||||||||||| ||| Sbjct 1504302 TCTACCGTGAACTGGATTGCATTAACGGCCGGCTTGGTGCGCAAATAGTACATGCCCGTC 1504243 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || || || ||| | |||||||| ||||| | | || |||| ||||||||| Sbjct 1504242 TTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTCGGCTCG 1504183 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 ||||| || || || ||||| || ||||||||| | || ||||| |||||||| Sbjct 1504182 GCCACGTGTATGTTGAACGATTGTGACTGATCGATAAATGCCCCGCGATCGGCAGCCATT 1504123 Query 65258 TCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 | |||| ||| | |||| |||||||| || || ||||| ||| || | ||| Sbjct 1504122 TTAATGC-ACGTTTTTACCGAAATCTCCCACACCGTTTTGTAGAGGTCGCGGATCTCCTG 1504064 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT--C 65374 |||||| ||||||| ||| | |||||| | | | |||| || ||| | Sbjct 1504063 CGGAATCGATTCAATGTTCTGAATGGAACCATTATTAGACAAAATGTTGTTCTTCATATC 1504004 Query 65375 GAC-TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433 || || ||| | |||| | | |||| ||| | | ||| | || | || || Sbjct 1504003 GAGATC---CCATAGGCCCATCGCAGTCAGATCTTGCAGTAGATGATGGTTCACCACCTG 1503947 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 ||||||||| || || ||||| || || | ||| |||||| || || || || || Sbjct 1503946 GAACTCGCCCGATAGCACACGTCGATTGTAAACGTTCGACGTGTACGGCTCGAAAGACTC 1503887 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 | ||||||| | |||||| || || || || || ||||| || || | || | || || Sbjct 1503886 ATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCATCGGGGCCAACAGTAGCGAATT 1503827 Query 65554 TCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATC 65613 || | |||| | || | || || | || || |||||||||| | | | | Sbjct 1503826 ACGAATGCCGTGCTTTGCGATCTTCTCTTTCAGCTCAGCCCAGTTCCAAA---GATC--C 1503772 Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673 |||| ||| |||||| || | ||||| | || | || |||| || Sbjct 1503771 GTCGGT-TCCTTCTTCCACATCTCGTATTGCAAAATGCCTTTGCTCACCGGACTTCCTGC 1503713 Query 65674 GAAACTATCGTACACTCCCTCCTCCT--TGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 | | |||||| || ||| | | || ||| | | ||||| | || || || || Sbjct 1503712 ATATGTCTCGTACGGACCTTCC-CGTGCTGCCAACTCG-CAGCTAGCTTCCAGCGCCCCA 1503655 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791 | ||||||| || || || || |||| || | ||||||| ||||| ||||| || Sbjct 1503654 TAGTAAATGGATTCAAATATTTGTTGATTCAGCTTTTGTGCCTCTTCGCTTTCGTATGG- 1503596 Query 65792 ATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 ||| | ||||| | || | ||||||| || || || || ||||||||||| | ||| Sbjct 1503595 ATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCACACCGATACCGATGGGCCTATG 1503536 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 |||| |||||| || | || || ||||| || ||||| ||||| ||||| || || Sbjct 1503535 GCGCATATTGGAGCGCTTTGCTTCCGGTACCGGATAGTAGTTGATGTCGATGATTTTGTT 1503476 Query 65911 CAAATTGCGTGTCACCACATGCACGATA--CGTC-GCAATTGTTCGAAATCAAAATGTTT 65967 || |||||| || || | | ||| | | || || |||| |||| | | Sbjct 1503475 CAGATTGCGCGTAACGATCTTGGCGACATCCTTCAGC-----TTCG----CAAAGTCGTA 1503425 Query 65968 AGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027 | | || | | | || ||| || || |||| || || || ||||| Sbjct 1503424 TGTCC---------TGTCAGCCTTTACGAACATGTTCAGTGCAATCGAGGCCAGATTGCA 1503374 Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087 || || ||||| || | | |||||| |||||||||||||||| || ||| Sbjct 1503373 AACCGCAATCTCATCTTTCGACGAATACTCCACAATTTCGGTGCACAAGTTGGAGCACTT 1503314 Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147 ||||| || | |||||||| || || || |||||||||||||||||||||| ||| || Sbjct 1503313 AATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTGTACAGCATATA 1503254 Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207 ||| ||| || || || || || |||||||| ||| ||| | | | | |||||||| Sbjct 1503253 CGGTACGCCCGTTTCCACCTGCGATTCAATGATCGCGAACCACAAATCTTGCGCCTTCAC 1503194 Query 66208 CGTACGTAC----CG-CCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGAT 66262 | || | || |||| |||| ||||||| ||| || ||||| | Sbjct 1503193 CTGTCGAATAAAGCGTCCCT--CTTT---TTCGTAACCGGTGTACAGCGTCTCGAACTCT 1503139 Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322 || ||||| ||| | || | ||||| | ||| ||||||||||| ||| | Sbjct 1503138 TCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGCTCCACATTTCG 1503079 Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 | | ||||| || ||| || || || |||||||| || |||||||| | |||||| Sbjct 1503078 TTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAGAACATGTCGCGT 1503019 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 || || |||||| ||||| || || | || || ||||| || | ||| | Sbjct 1503018 GCACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGAATACATCGCCG 1502959 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502 ||||||||||| ||||| ||||| || | ||| |||||| |||||| ||||| || Sbjct 1502958 TGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCACCCTGGTCCACA 1502899 Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562 || ||||| ||||||| | || |||| ||| ||||| | ||||| || | || || Sbjct 1502898 TACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGAAATCCCGTTC 1502839 Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622 || ||| |||| | ||| || || ||| ||| || ||||| ||||| || || Sbjct 1502838 GTACCGGAGATGTACGTTCCCTTCGCACGAATACAGTGCACGTTCAGCCCAATTCCGCCA 1502779 Query 66623 GCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGT 66680 || | || || || |||| | | || || || | | || || ||||| || Sbjct 1502778 GCAGATTTTGAAAT--CAGCGCGCACTGCTTCAGCGTGTCGTAGATACCTTCAATACTGT 1502721 Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740 | | ||||| || || | || || | || || | || || || | || Sbjct 1502720 CGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTGCGTTGCCGCTGCGA 1502661 Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800 | | ||| |||| || || |||||||| | |||| ||||||| ||||||||| Sbjct 1502660 ACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCGACAGCAAATTGTATGTCTCGATGG 1502601 Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCC 66860 | ||||| || | ||| |||||||| |||| ||| ||||||| | || || || | Sbjct 1502600 CTGCATCGATATCTTCACCATGAATACCGATCGCAACGCGCATCAACATGTGCTGCGGTC 1502541 Query 66861 GTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 |||| || | | || ||| | || | ||||| ||||||| || |||| Sbjct 1502540 GTTCAACGATCTTGCCCCGGATCTTCAACAGATAGGATCGTTCCAAAGTTTTGA 1502487 >seq112 Length=21277816 Score = 203 bits (224), Expect = 3e-47 Identities = 304/431 (71%), Gaps = 3/431 (1%) Strand=Plus/Minus Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 ||||||||||| || ||| | ||| |||||| ||| || || ||||| | || ||| Sbjct 19493549 TTCAATGCCATTGAAACGTTGCCGTGCGTGAAGAAGAAGGCAGACTGGGCACTGAACTGG 19493490 Query 61459 ATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518 ||| | || | | ||| | ||||| ||||| | | || ||||||| ||||| || Sbjct 19493489 ATCTCGAGCAAGAAGGCAAACTTTGGCGAACGTGTCGTAGCGTTTGCGGCTGTCGAAGGA 19493430 Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578 | || ||||| || |||||||| || || ||| | ||||| || || |||||||| Sbjct 19493429 ATCTTCTTCAGCGGTAGCTTTGCCGCCATTTTCTGGCTAAAGAAGCGAGGCCTTATGCCG 19493370 Query 61579 GGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCT 61638 || ||||||||| || ||| |||| ||||||||||| || |||| ||||| ||||| Sbjct 19493369 GGACTGACCTTCTCGAACGAGCTGATTTCACGCGACGAAGGACTGCACTGTGACTTTGCC 19493310 Query 61639 GTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATT 61698 || | ||||| ||||||||| | || || ||||||| ||| || || Sbjct 19493309 TGCCTGATGTTCAA---GTATCTGGTGCAGAAACCTTCCAAGGAGCGGGTGACGGACATC 19493253 Query 61699 GTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTC 61758 | ||||| ||||| ||||| || |||||| |||| | || |||| ||| | Sbjct 19493252 ATCCGTGATGCGGTTGTGATCGAGCAAGAATTTTTGACGAAGGCCCTGCCGGTCGATATG 19493193 Query 61759 ATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTG 61818 |||| ||||| || | ||| ||||||||||| ||||| || || ||||| ||| || || Sbjct 19493192 CTCGGTATGAACTGCGAACTGATGTCGCAGTACATTGAGTTCGTGGCCGATCGTTTGCTG 19493133 Query 61819 GTCGATTTGGG 61829 | || ||||| Sbjct 19493132 ATGGAGTTGGG 19493122 Score = 165 bits (182), Expect = 6e-36 Identities = 198/266 (74%), Gaps = 6/266 (2%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||||||||||||||| ||||| ||||| ||||||||| | ||||| |||||||| || | Sbjct 19493929 AGGCGGAAGCTTCCTTTTGGACCGTGGAAGAGGTCGATCTCTCCAAGGACATGAAGGATT 19493870 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 |||| || | | |||||| ||| |||||||| || ||| | || ||||||| Sbjct 19493869 GGGAATCGCTGAAACCGAGCG---AACGTCATTTCATCTCGCACGTGCTTGCCTTCTTTG 19493813 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| || || |||||||| || || || | |||| || ||| |||||||| || | Sbjct 19493812 CCGCATCCGATGGTATCGTTAACGAAAACCTGGTGGAGCGCTTCAGCCAGGAGGTACAGG 19493753 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | ||||||| || || || ||||| || || || || ||||| ||||| ||| |||| Sbjct 19493752 TAACGGAGGCACGCTGCTTTTACGGGTTTCAAATAGCGATGGAAAATGTGCACAGCGAGA 19493693 Query 61343 TGTACAGTGTTCTCATCGATACGTAC 61368 ||||| | || ||||| |||||| Sbjct 19493692 TGTACTCACTGCTAATCGACACGTAC 19493667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564714845920