Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq24 104 3e-17 >seq24 Length=5879236 Score = 104 bits (114), Expect = 3e-17 Identities = 233/344 (68%), Gaps = 6/344 (2%) Strand=Plus/Minus Query 162496 GAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAA 162555 |||||||| ||||| || | || || | |||||||| ||||| || | ||| || Sbjct 3063546 GAGACACCGCAGAACGAGAAGACACCGTTCTATCCACGCTCCCCGTACGCCTGTGCCAAG 3063487 Query 162556 CTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGC 162615 | || || | |||||| | | |||||| | ||| || || || |||| | Sbjct 3063486 ATGTACGGTTACTGGATTGTGATAAACTATCGCGAAGCGTACGATATGTTCGCCTGCAAT 3063427 Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 || ||||| || |||||||| | ||| | ||||| | || ||||||||||| || Sbjct 3063426 GGGATTCTCTTTAATCACGAGTCACCGCGCCGGGGAGAAAATTTTGTCACACGCAAAATA 3063367 Query 162676 GTCCGAGCCTTGTCCCGAAT-TAGTG-TGGGACTCCAA-AGTGATCTACAACTTGGAAAC 162732 ||| | || | ||| || | | |||| || ||| | || | || || || Sbjct 3063366 ACCCGCTCGGTGGC--GAAGATATCGCTCGGACAGCAGGAGT-ACCTCGAGCTGGGTAAT 3063310 Query 162733 CTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATG 162792 || || || ||||||||||| ||||||||||||||||| || || |||||| | ||| Sbjct 3063309 CTTGATTCCAAGCGTGACTGGGGCCACGCCAAAGACTACGTCGAAGCGATGTGGCTCATG 3063250 Query 162793 CTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGA 162836 | ||||| || |||||||| |||| || || || || || || Sbjct 3063249 ATGCAGCAGGACAAGCCAGAAGATTTCGTTATTGCCACCGGGGA 3063206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691453339883280