Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_033705.1 Length=11731 Score E Sequences producing significant alignments: (Bits) Value seq57 78.8 7e-11 >seq57 Length=3884199 Score = 78.8 bits (86), Expect = 7e-11 Identities = 113/153 (74%), Gaps = 6/153 (4%) Strand=Plus/Plus Query 6690 CACATTAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAA 6749 ||| || || || || |||||||| |||||||||||| ||||||||| |||||||| Sbjct 40151 CACCTTTGCAAACCACGTTGATTACAAAAAATGGAATAACTATCAACGAGGGAAAGCAAA 40210 Query 6750 TAATCCTGTCTTT-AAAGTTATGGGTCAATTTTTGGG-GTTGCCCAATCTCTTTGTAAGG 6807 ||||| | |||| | || || ||||||||| ||| || ||| | |||||| Sbjct 40211 CAATCC-GACTTTCAGAGCGATTGGTCAATTTCGGGGATTTACCCTACCTCTTTTACTAT 40269 Query 6808 ACTCATGAATTCTTTGAGCAAAGTTTGATCTAT 6840 |||||||||| || || |||| ||| ||||| Sbjct 40270 ACTCATGAATGTTTCGA--AAAG-TTGTTCTAT 40299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37423714548440