Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq76 141 1e-31 seq47324 140 5e-31 >seq76 Length=4390 Score = 141 bits (156), Expect = 1e-31 Identities = 98/111 (88%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 777 GTCGCGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 836 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | | |||||||||| | |||||||| | |||||||| Sbjct 837 ACCACTACCCTTAAATTTGAGAAAGAGCTCTTAATCTGTCTTACCTCGATA 887 Score = 82.4 bits (90), Expect = 1e-13 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||| ||||||| |||||||||||||||||||||||| |||||||||| | |||| Sbjct 581 CATTGTAGCACGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATCG-CTCA 639 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | || | || ||| | | | | ||||| ||||| || Sbjct 640 ATCTCACCTT-GCTAAACACAAGTTGTCCCGCTAAGCAG 677 >seq47324 Length=448 Score = 140 bits (154), Expect = 5e-31 Identities = 97/110 (88%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 || ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 448 TCGCGTTCGTTATCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGCA 389 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 |||| |||| || | | |||||||||| | |||||||| | |||||||| Sbjct 388 CCACTACCCTTAAATTTGAGAAAGAGCTCTTAATCTGTCTTACCTCGATA 339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796405960488