Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq76 293 7e-77 >seq76 Length=4390 Score = 293 bits (324), Expect = 7e-77 Identities = 383/522 (73%), Gaps = 36/522 (7%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCA----AAAGAGCCCTGTATCAGTATTTATTGTCACTAC 58 |||||||||||||| |||| |||||| | ||| ||||| | |||||||| Sbjct 1705 ACTCATTCCAATTATG-GACCATCGTTAAAGAGGTCCATATTGTTATTTCTCGTCACTAC 1763 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1764 CTCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCA 1823 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct 1824 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTCGCAACCATGG 1883 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||| || ||| |||||||| | ||||||||||||||| ||||||| || | ||| ||| Sbjct 1884 TAGTCCTCTACACTACCATCAATAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCGG 1943 Query 239 -CTCAA--GGCCATGCGATTCGTTAAGTTATTATGA-ATCA--CCAAGGAGCCCCGAAGG 292 | ||| | |||| |||| | |||| || ||| |||| ||| || || Sbjct 1944 TCGCAAGCGACCATACGATCGGCATCCTTATCCAGACTTCAACTCAAGCCACCCGGAGGG 2003 Query 293 GCGTTGGTTTTTTATCTAATAAATACACCCCTTC---------CGA----AGTCGG---- 335 ||||| ||| ||||||| | |||| ||| ||| ||||| Sbjct 2004 CGGTTGG---TTTCACTAATAAGTGCACCGGTTCCTCCCCGCGCGAGGCGGGTCGGTCCC 2060 Query 336 GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGTAA----GGTA 390 || | | ||||||||||||||| | || |||| |||||||| | | | | || | Sbjct 2061 GGCATGTTGCATGTATTAGCTCTGGCTTTTCCACAGTTATCCAACTAACTGATGGGGGGA 2120 Query 391 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCT 450 ||| | || ||| ||| | || |||||| | || |||||||| | | | | Sbjct 2121 TGATCTTGTGAATTATAGCTGTTATACTGAGCCTTATGCGGTTTCACTTTCAACGAAGTT 2180 Query 451 TATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 |||||||||||||||||||||| ||||||||||||| ||| Sbjct 2181 CGTACTTAGACATGCATGGCTTAACCTTTGAGACAAGCGTAT 2222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509628971008