Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq609 111 2e-19 >seq609 Length=4955 Score = 111 bits (122), Expect = 2e-19 Identities = 340/523 (65%), Gaps = 2/523 (0%) Strand=Plus/Plus Query 162316 GAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAGCCTGAATAC 162375 ||| | || ||||| | || || || ||||| ||| |||| ||||| | | |||||| Sbjct 1673 GAAGTTTACAACCTGGCCGCGCAAAGCCACGTCAAGATTTCGTTTGACCTGAGCGAATAC 1732 Query 162376 ACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGGT 162435 || || || ||||| ||||||| ||| | | ||||| ||| |||| | || Sbjct 1733 ACGGCTGAGGTAGACGCGGTGGGCACGCTACGACTTCTAGATGCCATCCGCACGGTGGGG 1792 Query 162436 ATGGAATCATACGTAAGAATCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAG 162495 |||| || || | ||||||| || || ||||| || || || Sbjct 1793 CAGGAAAAATCTGTCCGCTTCTACCAGGCCTCGACGTCCGAGCTGTACGGTAAGGTGGCT 1852 Query 162496 GAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAA 162555 || || || || || |||| || || | ||||| || || || |||| || || Sbjct 1853 GAAACGCCACAAAACGAAAAGACACCGTTCTATCCGCGTTCGCCATATGCTTGCGCGAAG 1912 Query 162556 CTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGC 162615 | || || | ||||||| | | ||||||| | || ||| || || |||| | | Sbjct 1913 ATGTACGGATACTGGATCGTGATAAACTACCGCGAGGCCTACGATATGTTCGCCTGCAAC 1972 Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 || ||||||||||| ||||| | ||| | ||||||| || || ||||| |||||| Sbjct 1973 GGGATTCTATTCAACCACGAGTCACCGCGCCGGGGAGAGAATTTTGTGACACGAAAGATC 2032 Query 162676 GTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAA-AGTGATCTACAACTTGGAAACCT 162734 || | || | ||| | || | | | || || || | || || || Sbjct 2033 ACTCGTTCGGTGGCGAAAATCTCACTCGGCCAGCTGGAATGC-CTTGAATTAGGTAATCT 2091 Query 162735 CAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCT 162794 | | | || |||||||| ||||||||||||||||| || || |||||| ||||| | Sbjct 2092 CGACTCAAAGCGAGACTGGGGCCACGCCAAAGACTACGTGGAAGCCATGTGGCTGATGAT 2151 Query 162795 TCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGAG 162837 ||||| |||||||| || |||| || ||||| || || ||| Sbjct 2152 GCAGCAGGAGAAGCCGGAGGATTTCGTTATCGCCACCGGAGAG 2194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691017979884480