Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3577 392 3e-104 seq17361 354 6e-93 >seq3577 Length=7701 Score = 392 bits (434), Expect = 3e-104 Identities = 1216/1858 (65%), Gaps = 43/1858 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||||||||||||||||||||| | |||| ||| || | | |||||||||||| ||| Sbjct 5705 TCGACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAATAGTACATGCCAGTC 5764 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || ||| || | || || ||||| | | ||| | || || || ||| Sbjct 5765 TTCAAACCCATCTTCCACGCGTGAAAGTGGATCGAGGTAAGTTTACCGTAGTTGGGTTCG 5824 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCCAT 65256 ||||| || || || ||||| || ||| |||||| |||| |||||||| || ||||| Sbjct 5825 GCCACGTGTATGTTGAACGATTGGGACTGGTCGATG-AACGCTCCACGATCGGCCGCCAT 5883 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| | |||| |||||||| || || |||||||| || || || Sbjct 5884 TTGGATGC-ACGTTTTGACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACGTCCT 5942 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGC---AATAATGCGATTACGCA 65372 |||| || | |||||| | ||||| || || | |||| | | || | || || Sbjct 5943 TTGGTATTTTCTCAATCTTCTGGATCGATCC--GTTGTGCGCCAGGATTGTG-TTCTTCA 5999 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 | || ||||| || || | || | | | || ||| | || | || | Sbjct 6000 TTTCATCGTCCCACAGCCCGTGCGCGGTCAGGTCCTTGATCAGATGATGGTTCACAACCT 6059 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 | |||||||| || || || || ||| |||| ||| |||||| || || || || | Sbjct 6060 GAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGCTCGAAAGACT 6119 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| | ||||| ||||| || || |||||||| || || | || || ||||| Sbjct 6120 CGTTGTTGCCCAATATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAGCAGCAGTGAGT 6179 Query 65553 TTCGCAATCCGTTCATTT-CAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 | || ||||| | ||| | || || | |||| | |||| ||||||| ||| Sbjct 6180 TACG-AATCCCATGTTTTGCGATCTTTTCCTTCAATGCCGCCCAATTCCACA--GGTC-- 6234 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 ||||| ||| | |||||| || | ||||| | || | || |||| |||| Sbjct 6235 -CGTCGGT-TCCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTTACCGGACAACCT 6292 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 | | | |||||| || |||| ||| | || ||||| | || | || || Sbjct 6293 TCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCGCAGCTAGCTTCCAACGCCCCA 6352 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791 | || ||||| || || || | |||| || | | || | || ||||||||||| Sbjct 6353 TAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTTGCGCTTGCTCACTCTCGTACGGA 6412 Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 | ||||||| | || | ||||||| ||| || || || || ||||| ||||| || Sbjct 6413 AAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCGATCGGACGGTGG 6472 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| || || ||| |||| || || || |||||||| || | || || || || Sbjct 6473 CGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGTAGTTCACGTCAATGATCTTGTTA 6532 Query 65912 AAATTGCGTGTCACCACATGCACGA--TACGTC-GCAATTGTTCGAAATCAAAATGTTTA 65968 | |||||| || || | | ||| | | || || || || |||||| | Sbjct 6533 AGATTGCGCGTTACGATCTTGGCGACCTCCTTCAGC--TTCTT-GAAATCGTAC------ 6583 Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 | ||||||||| | ||||| ||| || | |||| || || | ||||| Sbjct 6584 GTACGATCGGG----CTGGACA-----AACATGTTCAACGCAATCGAGGCCAAATTGCAC 6634 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 || || | ||||| | | ||||| || || || ||||| || || || Sbjct 6635 ACGGCCACTTCGTCCTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTTCGAACACTTG 6694 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 |||||||| | || || || || || ||||||||||| ||||||||||||| ||||||| Sbjct 6695 ATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTAC 6754 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || ||| || || || || ||||| ||||| || ||| ||| | | |||||||| Sbjct 6755 GGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTGCGCCTTCACT 6814 Query 66209 GTACGTACCGCCCTAC-CTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 ||||| || || || ||| | ||||| ||| || | ||||| ||| || Sbjct 6815 TGACGTATAAACCGACACTCTGCCT-CGTAACCCGTGTACAGCTTCTCGAACTCTTCGCC 6873 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 ||| |||| || | ||||| | ||| || ||||||| ||| ||| | Sbjct 6874 CCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACATTTCATTCGC 6933 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 || ||||| ||| || ||||| ||||||||||| |||||||| | ||||| || || Sbjct 6934 CTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTCGCGAGCGCG 6993 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 |||||| ||||| ||||| || || || |||||||| | || | ||||| Sbjct 6994 AACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCGTGCCA 7053 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 ||||| |||||||| || |||| ||| || || || || || || ||||| || Sbjct 7054 CGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATCAACGTACCG 7113 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || |||||| | ||||| | ||||||||| | |||||| || | || || || || Sbjct 7114 TGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCGTTCGTACC 7173 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | |||| | ||| || || || ||| |||||||| || ||||||||||||| Sbjct 7174 GGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCAGCCCGATACCACCGGCCGA 7233 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 || ||||| || || | || ||| | | || ||||| ||| || || Sbjct 7234 TTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATGCTATCGTCCGA 7293 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 || ||||| || |||| || ||| || || | ||||| |||| || | ||| Sbjct 7294 CATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCCGCAAACATGGT 7353 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | ||||| ||||||||| | || | ||||||||||||||| | || || Sbjct 7354 CGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCGATCGCTGCCTC 7413 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866 ||||| ||||| || || |||| || ||| ||||||| | | || |||| || | Sbjct 7414 AATGTCCTCGCCGTGGATGCCGATGGCGACA-CGCATCAACATATGCTGCGGCCTCTCCA 7472 Query 66867 CCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | | | |||| || | || || || || || ||||| || || | ||| || || Sbjct 7473 CAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAAACCGAAATA 7530 >seq17361 Length=8649 Score = 354 bits (392), Expect = 6e-93 Identities = 517/727 (71%), Gaps = 9/727 (1%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||||||||||||||||||||| ||||| ||||| || |||| || |||||||| |||| Sbjct 1237 AGGCGGAAGCTTCCTTCTGGACAGTGGAAGAGGTGGACCTGTCGAAGGACATGAAAGACT 1178 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 |||| || | | |||||| | | || ||||| || || | || ||||| | Sbjct 1177 GGGAATCGCTCAAACCGAGCG---AGCGTCACTTCATCTCGCACGTACTTGCCTTCTTCG 1121 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| |||||||||||||| || |||||| | |||| || ||| ||||||||||| | Sbjct 1120 CCGCCTCGGACGGTATCGTAAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGG 1061 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 || ||||||| || || |||||||| || |||||||| |||||||| || ||| || | Sbjct 1060 TGACGGAGGCCCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGTGAAA 1001 Query 61343 TGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCA 61402 ||||| | || ||||| |||||||| | || | | || || || |||||| Sbjct 1000 TGTACTCGCTGCTGATCGACACGTACATACGCGACCCGAACGAGCGGGAGTATCTGTTCA 941 Query 61403 ATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCA 61462 | || ||||| ||| ||||| || ||| ||| || || ||||| | || |||||| Sbjct 940 ACGCGATCGAAACGCTACCGTGCGTCAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCT 881 Query 61463 CCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTAT 61522 |||| | | ||| | || || || || || | || || || | || ||||| | | Sbjct 880 CCAGCAAGAAGGCCAACTTCGGGGAGCGTGTGGTTGCCTTCGCTGCCGTTGAGGGCATTT 821 Query 61523 TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTC 61582 | |||||||| ||||| || ||||| ||| ||||||| || || || ||||| || | Sbjct 820 TCTTCAGTGGCAGCTTTGCGGCTATCTTCTGGCTGAAGAAGCGCGGCCTAATGCCGGGGC 761 Query 61583 TGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTT 61642 |||| ||| ||| ||| |||| || ||||||||||| |||| ||||| ||||| Sbjct 760 TGACGTTCTCCAACGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCCTGCC 701 Query 61643 TGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTC 61702 || | ||| || ||||||||| | ||||| ||||||| ||| ||||| | | Sbjct 700 TGATGTTC---CGGTATCTGGTGCAGAAACCGTCTAAGGAGCGCGTGACGGAGATCATCC 644 Query 61703 GTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCG 61762 | || ||||| ||||| ||||| || || || | || |||| ||| | ||| Sbjct 643 GCGATGCGGTCGTGATCGAGCAGGAGTTCCTCACCAAGGCGCTGCCGGTCGACATGCTCG 584 Query 61763 GCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG 61822 ||||||| || | ||| ||||||||||| || || || || || || || || || | | Sbjct 583 GCATGAACTGCGAACTGATGTCGCAGTACATCGAGTTCGTCGCGGATCGGTTGCTGCTGG 524 Query 61823 ATTTGGG 61829 | ||||| Sbjct 523 AGTTGGG 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397467342491360