Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2556 132 2e-28 >seq2556 Length=16943 Score = 132 bits (146), Expect = 2e-28 Identities = 117/146 (80%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| ||||||||||| | ||||||||||||||| Sbjct 16102 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGAGGTAAACTCCTTCTAAAGCTAAAT 16161 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | ||| ||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 16162 ACCACCATGAGTCCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 16221 Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185 ||||||| ||| || |||||||| || Sbjct 16222 AGAGAGTCAAATAGTACGTGAAACTG 16247 Score = 80.6 bits (88), Expect = 1e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 || |||||||||||||||||||||||||||| ||| ||||| ||| |||||| ||| || Sbjct 16867 TGCGACCCGAAAGATGGTGAACTATGCCTGATCAGGTTGAAGTCAGGGGAAACCCTGATG 16926 Query 627 GAGGCTCGCAGC 638 |||| || ||| Sbjct 16927 GAGGACCGAAGC 16938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079939446650