Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2556 334 2e-89 >seq2556 Length=16943 Score = 334 bits (370), Expect = 2e-89 Identities = 359/466 (77%), Gaps = 19/466 (4%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 1638 TATTTCTCGTCACTACCTCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 1579 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1578 TTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA 1519 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| | |||||||||| || ||| |||||||| | ||||||||||||||| ||||| Sbjct 1518 CCCGTCGCAACCATGGTAGTCCTCTACACTACCATCAATAGTTGATAGGGCAGACATTTG 1459 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGAT-----TCGTTA---AGTTATTA--TGAA 272 || || | ||| | | | || || | |||| || ||| || | | | | || Sbjct 1458 AAAGATCTGTCGTCAGTGCGAGACCGTACGATCGGCATCCTTATCCAGATTTCAACTCAA 1399 Query 273 TCACCAAGGAGCCCCGAAGGGCG-TTGGTT-TTTTATCTAATAAATACACCCCTTC--CG 328 | || || || ||| ||||| || || ||| ||||||| | |||| ||| || Sbjct 1398 --AGCACGGCCCCGCGAGGGGCGCGTGATTGGTTTGACTAATAAGTGCACCAGTTCCGCG 1341 Query 329 AAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAA 386 | ||| || || |||||||||||||||||| || |||| |||||||| ||| | Sbjct 1340 AGGTCCTGGCAATTTGCATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTAACTTTG 1281 Query 387 GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT 446 | | ||| |||| ||| ||| | || |||||| | || ||||||| || | | Sbjct 1280 GCGATGATCTTGTAAATTATAGCTGTTATACTGAGCCTTATGCGGTTTCACATTA-ATGT 1222 Query 447 TGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 |||| |||||||||||||||||||||| ||||||||| ||| ||| Sbjct 1221 TGCTCGTACTTAGACATGCATGGCTTAACCTTTGAGACGAGCGTAT 1176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510357361408