Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2381 414 8e-111 seq2001 230 2e-55 >seq2381 Length=1337761 Score = 414 bits (458), Expect = 8e-111 Identities = 1208/1842 (66%), Gaps = 35/1842 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || ||||| |||||||||||||| | || | |||||| | |||||||||||||| || Sbjct 918496 TCCACCGTAAACTGGATCGCATTTACGGCTGGCTTGGTACGCAGATAGTACATGCCAGTT 918555 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || ||| | |||||||| ||||| | | || |||| || ||||| Sbjct 918556 TTCAAACCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCC 918615 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 || || || || || ||||| || ||||||||| |||| |||||||||||| ||||| Sbjct 918616 GCGACGTGAATGTTGAACGATTGCGACTGATCGATA-AACGCACCACGATCTGCGGCCAT 918674 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| || |||| |||||||| || || ||||||||| || | || Sbjct 918675 TTTGATGC-ACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTCCT 918733 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGAT-TACGCAT 65373 || || || |||| | |||| || ||| | | || | | || | | | | Sbjct 918734 GCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCATGT 918793 Query 65374 CGAC-TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 ||| || ||||| ||||| | | | | || || | | ||| | || | || | Sbjct 918794 CGAGATC---CCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 918850 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| ||||| || || | || | ||| |||||| || || || |||| Sbjct 918851 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 918910 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || ||||||| |||||||| || || || || || ||||| || || | || || || | Sbjct 918911 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 918970 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612 | || | |||| | | || || | ||| ||| |||||||||||| | | Sbjct 918971 TGCGAATACCGTGTTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACA---GATC-- 919025 Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672 ||||| ||| | |||||| || | |||| | | || | || |||| || Sbjct 919026 CGTCGGT-TCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGCCCT 919084 Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732 | | | |||||| || || ||| | | |||||| | || || ||| | Sbjct 919085 CGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGT 919144 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 | || || || ||||| || | |||| || | | ||||| ||||| |||||||| | Sbjct 919145 AGTAGATAGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGG-A 919203 Query 65793 TACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || | |||||||| || | ||||||| ||||| || || || ||||| || | || Sbjct 919204 TAGCGCATCAGGATGAACGCATCGGCCATGCCTTGCACGCCGATCCCGATCGGCCTGTGG 919263 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| |||||| || | ||||| || || || |||||||||| ||| || || ||| Sbjct 919264 CGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTC 919323 Query 65912 AAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAGG 65970 | |||||| ||||| | ||| | | | || | | | || ||| | |||| | Sbjct 919324 AGATTGCGCGTCACTGTCTTAGCGACTTCCTT-CAGCTTTGCAAAGTCATAC-GTTTTG- 919380 Query 65971 ACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGAC 66030 || | | |||||| || | ||| | || || || ||||| || Sbjct 919381 ----TCTTGCTTT---------ACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATAC 919427 Query 66031 AGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTAT 66090 |||| ||| || | | ||||| ||||| || ||||||| || || || Sbjct 919428 CGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTGCACAAGTTGGAACATTTGAT 919487 Query 66091 GGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGG 66150 |||||| | |||||| || ||||| || |||||||| ||||||||||||| ||||||||| Sbjct 919488 GGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGG 919547 Query 66151 AGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT 66210 |||||| || ||||| || || || || || ||| ||| | | ||||||||| Sbjct 919548 CACGCCGGTTTCCACTTGCGATTCGATTATCGCAAACCACAGATCCTGCGCCTTCACCTG 919607 Query 66211 ACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCA 66270 || | | ||| | ||||| ||| || | ||||| ||| ||||| Sbjct 919608 TCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCA 919667 Query 66271 TACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTC 66330 || || || | ||||| | ||| || |||||||| ||| | | | || Sbjct 919668 GGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTC 919727 Query 66331 TACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTG 66390 ||||| |||| || || || |||||||| || ||||| || | || ||||| || Sbjct 919728 CACACGCTGCATGAACAGGTCCGGTATCCACAGTGCGTAAAACATGTCCCGTGCGCGGAC 919787 Query 66391 CTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 |||||| ||||| ||||| || ||||| ||||| || || ||| ||||||| || Sbjct 919788 CTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACGG 919847 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 || || ||||||||||| | || || ||| || || || |||||||| || || Sbjct 919848 CTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTACCGCCCTGATCGACGTACCGTGC 919907 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 ||||||| |||| ||||||||||| || || ||||| || | || || || ||| Sbjct 919908 CGTATTGTTGTAGACGCGCAACATCGGCACCAGACCGTTTGAAATCCCGTTCGTACCGGA 919967 Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 |||| | ||| || || ||| ||| || ||||| || || |||||||||| ||| Sbjct 919968 GATGTACGTTCCCTTCGCGCGAATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTT 920027 Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690 || || ||||| | || || | | ||||| |||||| || | || Sbjct 920028 TGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACAT 920087 Query 66691 GGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGG 66750 ||||| ||| |||| || ||| ||||| | || || |||| || | || || Sbjct 920088 GGTCAACAGGAAGCAGGACGAAAGCTGGGGGCGCTGCGTAGCCGCCGCAAACATAGTTGG 920147 Query 66751 TGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAAT 66810 | ||||| ||||||||| | |||| |||||| |||||||| | ||||| || Sbjct 920148 CGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGAT 920207 Query 66811 GTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAG 66870 || |||||||| || || | ||| |||||||| | || || || || ||||| | Sbjct 920208 GTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGAT 920267 Query 66871 CCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 ||||||| | || ||||| || ||||||| ||| || Sbjct 920268 TTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTT 920309 >seq2001 Length=1904535 Score = 230 bits (254), Expect = 2e-55 Identities = 311/433 (72%), Gaps = 3/433 (1%) Strand=Plus/Plus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||||||||| ||| | ||| ||||||||||| ||||| ||||| | || | Sbjct 1560094 TGTTCAATGCCATCGAAACGCTGCCGTGCGTGAAGCGGAAGGCGGACTGGGCGCTGAACT 1560153 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | ||| | ||||| || || | ||||||| || | ||| |||| Sbjct 1560154 GGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGG 1560213 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 || | || ||||| || || ||||| ||||| ||| ||||||||||||| || |||| Sbjct 1560214 GTATCTTCTTCAGCGGCAGCTTCGCCGCGATCTTCTGGCTGAAGAAACGTGGCCTGATGC 1560273 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | || || |||||| || ||| |||| || |||||||| || |||| || || |||| Sbjct 1560274 CAGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTG 1560333 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | || | ||||| ||||||||| | |||||| ||||||| ||| |||| Sbjct 1560334 CCTGCCTGATGTTCAA---GTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGAGA 1560390 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 | | || || ||||| ||||| ||||| || ||||| | || |||| || Sbjct 1560391 TCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGGATA 1560450 Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 | | |||||||| || | || ||||||||||| ||||| ||||| ||||| ||| || Sbjct 1560451 TGCTGGGCATGAACTGCGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTTTGC 1560510 Query 61817 TGGTCGATTTGGG 61829 || |||| |||| Sbjct 1560511 TGCTCGAGCTGGG 1560523 Score = 221 bits (244), Expect = 1e-52 Identities = 212/269 (79%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||||||||||||||||||||||||||| || || ||| ||||||| || ||||| || | Sbjct 1559697 AGGCGGAAGCTTCCTTCTGGACGGTGGAAGAAGTTGATCTGTCCAAGGATATGAAGGATT 1559756 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 ||||| || | | |||||| ||| || ||||| || ||| |||| ||||||| Sbjct 1559757 GGGAGTCGCTGAAACCGAGCG---AACGCCACTTCATCTCCCACGTGCTGGCCTTCTTTG 1559813 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 | || || ||||||||||| || |||||| | ||||||| ||| ||||||||||| | Sbjct 1559814 CTGCGTCCGACGGTATCGTGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGG 1559873 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | |||||||||| || |||||||||||||||||||| ||||| ||||| ||| |||| Sbjct 1559874 TTACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGA 1559933 Query 61343 TGTACAGTGTTCTCATCGATACGTACATC 61371 ||||| | || ||||| ||||||||| Sbjct 1559934 TGTACTCGCTGCTGATCGACACGTACATC 1559962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397554321548720