Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2036 98.7 4e-15 seq702 87.8 7e-12 >seq2036 Length=1936590 Score = 98.7 bits (108), Expect = 4e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 626199 TCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGACC 626258 |||| |||| ||| | ||| ||| | ||||| | || | || | ||| |||||||| Sbjct 195096 TCGACTGGGCGGAGTGCTTCATGGCGATGGCCTTCCTGGCCGCGAAACGCAGCAAGGACC 195037 Query 626259 CCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGGCT 626318 || || |||||||| || |||||||| ||||||||||| || ||||| || || | Sbjct 195036 CCTCGACACAGGTCGGTGCGTGCATCGTGAACGAGGACAACCGTATCGTGGGCATCGGGT 194977 Query 626319 ACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGG 626362 ||||||| ||||| ||||||| |||||| | || || ||| Sbjct 194976 ACAACGGATTCCCCAAGGGCTGCAGTGACGATGAGTTCCCGTGG 194933 >seq702 Length=496488 Score = 87.8 bits (96), Expect = 7e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 21735 TGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACC 21794 || ||||||||||| || | ||| | |||||||| || || || ||||| || || Sbjct 401566 TGTGCGATGCGATCCCCTTTCTTAACTTCAAAGTTTGTCTCCGAATGATTGAACAGTACA 401507 Query 21795 ACCCCGACCTTGCCCCTATAAGAACT-GTCGACGACCCCGGCGCCGACGTCGAGCCCGTT 21853 || ||||| || |||| | || || ||||||||| |||||||| || |||| ||| Sbjct 401506 ACTCCGACGTTACCCCGGT-AGTCCTCGTCGACGACACCGGCGCCCACATCGATGAAGTT 401448 Query 21854 CTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAG 21893 |||| ||||| ||| || | ||||| || ||||| ||| Sbjct 401447 TTTCACGGCCAAACCGGAACGTGGAGCCACTCGGCCATAG 401408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084661956503754