Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_033705.1 Length=11731 Score E Sequences producing significant alignments: (Bits) Value seq109 149 5e-32 >seq109 Length=4790 Score = 149 bits (164), Expect = 5e-32 Identities = 310/455 (68%), Gaps = 20/455 (4%) Strand=Plus/Minus Query 6526 ATGTCCTGGAACCTAAGACTATATTTTGTTTTAACTGAATTTCTTATTAAACGATATTAC 6585 ||||| ||||| |||||| ||| ||||| || |||||| ||||| ||| |||| Sbjct 4036 ATGTCATGGAAACTAAGAGAATACTTTGTCATAGCTGAATACCTTATCAAAACCCATTAT 3977 Query 6586 GTTCCCTTATTTAGTGGATTGACAATGGCAGATGATTTTAACACCGTTATTC-GAAAGT- 6643 ||| || | | |||||| ||||| || || ||||| || ||| |||| | Sbjct 3976 GTTAAATTGTGCCCCGAATTGACCATGGCTGACAGCTTGAACACAGTAATTGAGAAAATG 3917 Query 6644 TACTAGA--TCGGACCATGGGACAAGGA--GGCCTGACATACGAATATATCACATTAGCC 6699 || | | || || ||| ||| | | || |||| || | |||||| |||| Sbjct 3916 TATTTGGCGTCTGA----GGGCCAAAGTACGAACT--CATATGACAACATCACAATAGCA 3863 Query 6700 AATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATCCTGTC 6759 || || | ||||| | || ||||| ||| || |||| | || || || ||| || Sbjct 3862 AACCACGTCGATTATACGAAGTGGAACAACTTCCAGAGAGGTGATGCTAAAAACCCTATC 3803 Query 6760 TTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATGAATTC 6819 || |||| |||||||||||||| || || |||||||||||||| || || |||||| || Sbjct 3802 TTCAAAGCAATGGGTCAATTTTTAGGTTTACCCAATCTCTTTGTTAGAACCCATGAAATC 3743 Query 6820 TTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGT----TAGAGG 6875 || | | || ||| ||||||| || || ||| | ||||| | | | || | | Sbjct 3742 TTCGGGAAAGCGTTGTTCTATTACAAAGATAGACCTGACTTAACGCGTGTGGAAAATGGC 3683 Query 6876 AGGTGAGTTGATACCAACGACGGATGCTAAAGTCTGTTGGAATGGTCAATTGGGAGGATT 6935 | | ||| || || || |||||| ||||||||| | |||||||| ||||||| Sbjct 3682 ACATTAGTCAATGCC----ACAAATGCTATTGTCTGTTGGCAAGGTCAATTAGGAGGATG 3627 Query 6936 AGAGGGCCTGAGACAGAAGGGGTGGAGTGTAGTCA 6970 |||| || | || |||||||||||||| |||| Sbjct 3626 TGAGGCTCTTCGTCAAAAGGGGTGGAGTGTTGTCA 3592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37422811460540